Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1241 ATGGATTACTATTTTGGAAACCTTAATCCTAACCCTTATTACCATCACTCTGCCGTAGTGAACATGGCATCTCCCTCCTCCGAGTTCATGTTATCTGATTATCTCGTGTTGGAAGATGCTCTTGTTGTTGATCATCATCAAGAGTCTTGGTCACAAAGCACTGAAACTGAATCGTCGGAGAAAGCAACCTCCAGCGATGCAAGTCATGGGTTCGGTGATGCAACCTCCAACACCAACATGCATATAAAGTGCCAAAATAGTGGGATTAAGGGAAAGAATGCAGAAGTGAGTCAAAGGATAACGTTTAGAACCAGATCGCAACTTGAGGTTATGGATGATGGATATAAATGGAGGAAATACGGGAAGAAAACAGTGAAGAGCAGTCCCAACCCACGGAACTACTACAAGTGTTCAGGTGAAGGATGCGATGTGAAGAAAAGGGTGGAAAGGGATAGGGATGACTCCAACTATGTGTTAACAACGTACGACGGTGTCCACAATCATCAGACCCCGTCTACTGCCTACTACAGCCAAATGCCCTTGCTGCATTCTAATCATGATTGGGCCCTCCACCCTTCTGCAAACTCATAA 591 0.4467 MDYYFGNLNPNPYYHHSAVVNMASPSSEFMLSDYLVLEDALVVDHHQESWSQSTETESSEKATSSDASHGFGDATSNTNMHIKCQNSGIKGKNAEVSQRITFRTRSQLEVMDDGYKWRKYGKKTVKSSPNPRNYYKCSGEGCDVKKRVERDRDDSNYVLTTYDGVHNHQTPSTAYYSQMPLLHSNHDWALHPSANS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1241 196 MobiDBLite consensus disorder prediction 48 79 - -
Gso6g1241 196 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1241 196 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1241 196 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1241 196 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 9 176 - -
Gso6g1241 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 176 IPR044810 GO:0003700
Gso6g1241 196 Gene3D WRKY domain 95 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1241 196 SUPERFAMILY WRKY DNA-binding domain 103 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1241 Gso-Chr6 12062454 12065942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1241 9 191 WRKY Transcription Factor Family AT5G64810 42.473 1.45e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso6g1241 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1241 - - gmx:100127396 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1829 4 48570810 48573515 Gso6g1241 6 12062454 12065942 GST