Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1212 ATGATATGTCTTCCACCGCTATCTAGTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCAACAATGGTGGCTGAAATCATTGATCTTTCAGACTCCCCTCCATCATCACCCTGGTCATCTCATAATGATGCAGCAAGAATTCTCAATTTTGATTCTGTTTCTAATGAAAAAAATCAATTTGAGAAAGTTATTCCTATATCCTTAATGGCTTGCACAAATCCCAACCAGCCACAAACTAGTCTATGGCGAGCTGCTTCAAGACATACCAATGAGCACTCTCAGATTGCTACTACATTCCAACCCAGCATGCAATTACAAAGGGTTGCTACAGTACTTGAACCAGTACCTGAATCAATCACATGCATGTTTCCTCATGGAGCTAGACTCAAGGAGCCCTGGACTCACAGAGAACATGAGCTATTTTTGATGGGGCTAATAAAGTATGGAAAAGGTCACTGGAGCAAAATTGCTAGACACTTTTTGTTGAATAAGACACCACAACAAGTTCAGAGCTATGGTGCTAGCTTCTTCAGGAATCTACCATCTACACACCTACATGGTTTTAGGAGAAGGAAGCCAAGCTACTCGACATCTAGCCTCATGTCCAAAAACAACAACCTTATGGCTGCATCTGCATCTACCACCTCATACTTCATGCCTATGATTGTTAATGAGCCACAACAAACTCACATGTTTTTCCCAGAGAATGCTCCTTTAAATTTTCTTCTGGCCCCATCACATGGAGAAGCAAGTAGCAGCAACAACAACACCACCATGTATGGGTTCCAGATGCAGACAAGTGGTGCAAGAACTTCCATGAATGCTAGTGCTAATGGAGAAGTTGATTTGGAACTGCGTTTGGGTTGA 864 0.4236 MICLPPLSSCSLSLSLSLSTMVAEIIDLSDSPPSSPWSSHNDAARILNFDSVSNEKNQFEKVIPISLMACTNPNQPQTSLWRAASRHTNEHSQIATTFQPSMQLQRVATVLEPVPESITCMFPHGARLKEPWTHREHELFLMGLIKYGKGHWSKIARHFLLNKTPQQVQSYGASFFRNLPSTHLHGFRRRKPSYSTSSLMSKNNNLMAASASTTSYFMPMIVNEPQQTHMFFPENAPLNFLLAPSHGEASSSNNNTTMYGFQMQTSGARTSMNASANGEVDLELRLG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1212 287 Gene3D - 130 180 - -
Gso6g1212 287 Pfam Myb-like DNA-binding domain 129 171 IPR001005 -
Gso6g1212 287 ProSiteProfiles Myb-like domain profile. 129 176 IPR001005 -
Gso6g1212 287 CDD SANT 131 171 IPR001005 -
Gso6g1212 287 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 40 287 - -
Gso6g1212 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 168 IPR017930 -
Gso6g1212 287 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 40 287 - -
Gso6g1212 287 SUPERFAMILY Homeodomain-like 131 179 IPR009057 -
Gso6g1212 287 SMART sant 128 178 IPR001005 -
Gso6g1212 287 ProSiteProfiles SANT domain profile. 127 180 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1212 Gso-Chr6 11780306 11782201 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso6g1212 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1212 - - gsj:114414101 545.043