Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1201 ATGGCTGCAGGTTCTTCTTCAAATTGGGTCATGGAAAGTGGTGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTAGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTACGAGCTACTTAAGAAAATCAAGGAATCGTCGGTAACGAAGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACACGAATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATTCTAAAGCCCCTCAAACAATCTGATGTAAAAAAACTGACATGTCAGTTAATGAATTGA 441 0.4172 MAAGSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRSKVNMVITDYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1201 146 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Gso6g1201 146 Gene3D - 18 146 - -
Gso6g1201 146 SMART REC_2 17 141 IPR001789 GO:0000160
Gso6g1201 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 145 IPR045279 GO:0009736
Gso6g1201 146 SUPERFAMILY CheY-like 17 144 IPR011006 -
Gso6g1201 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 6 145 - -
Gso6g1201 146 Pfam Response regulator receiver domain 19 139 IPR001789 GO:0000160
Gso6g1201 146 CDD REC_typeA_ARR 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1201 Gso-Chr6 11663745 11665950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1201 2 146 Response Regulator Gene Family AT3G56380 67.568 1.24e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso6g1201 Response_reg 1.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1201 K14492 - gmx:100778707 290.812