Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1167 ATGAAAATTGTTAAGGAATGGTTCAAGTGGTCGCAGACTGTGCTTAGCATGCTTTTAGTGCAAGTTTTTGCAACCGGGATGCAGATTCTATCGAGGGTTATACTGGTTGAGGGCACTTTCATTTTTGCACTCATTGCATACCGTCATGCTGTTGCTGCTATTTGTGTTGCTCCTTTTGCTTTCTACTTTGAAAGAGACGGCGCGAAGAAGTTGAGGTGGTCGATTTGGTTTTGGCTCTTCCTAAACGCCTTGGTGGGGATAACAATGGCCATGGGATTGTTCTATTATGGTCTGCGAGACACATCAGCTACCTACTCAGTGAATTTTCTCAGCTTGGTTCCTATTTTCACTTACATTATCTCTATTGTATGCAGAATGGAGAGGTTGAGGTTTCAAACATGGACGAGTAAAGTGAAGACAATGGGGGCAGTTTTGTGTGTTGGGGGAGCATTAACAACTAGTCTATACAAGGGGAAGGAATTCTATATTGGTCAAAGTAGTCATCAGACTCACAGTACAGTTGAGGCATCAAAAACCAACATGCTTCGTGGCACTCTCTTTTTGCTTGGAAGCTGCTTGTCATACACAGCTTGGTTCATTGTGCAAGTTAAGTTGCTTGAAATATTTCCGTTCAAATATTGGGGAACAATGCTCACGTGCATTATAGCATCAATTCAAGCAACCATAGTAGGAATATGCTTAGATGGCAGAAAGGTTACTTGGAGTTTAAAGTGGAATCTACAACTAGTGACTATAATTTACTCGGGAGCATTGGCTACCGCTGCTACATTTTGCTTAATTTATTGGGCAATTGCCATCAAAGGACCAACTTATCCCACGATGTTCAATCCATTGGCTCTTCTTTTTGTGGCAATATCAGAAGCTCTCTTACTGGGTGAACCAATCAGTCTTGGAATTTTGCTGGGCATGTTTTTGATCCTAATAGGATTGTACTCATTTTTGTGGGGCAAAGGGAAGGAGACGCAATGTATGCTTCAAGCATCTGGAGAAGTTTCAACAACTATGGCAGCTGAGTCTGCTGGAGTGCACTCCACAGCCACAGTGGTACCAAGTTTTTCACCTAGGCATGCAGTTCTTAGAGTTGAAAAGAATGACAGAAACTGA 1125 0.4222 MKIVKEWFKWSQTVLSMLLVQVFATGMQILSRVILVEGTFIFALIAYRHAVAAICVAPFAFYFERDGAKKLRWSIWFWLFLNALVGITMAMGLFYYGLRDTSATYSVNFLSLVPIFTYIISIVCRMERLRFQTWTSKVKTMGAVLCVGGALTTSLYKGKEFYIGQSSHQTHSTVEASKTNMLRGTLFLLGSCLSYTAWFIVQVKLLEIFPFKYWGTMLTCIIASIQATIVGICLDGRKVTWSLKWNLQLVTIIYSGALATAATFCLIYWAIAIKGPTYPTMFNPLALLFVAISEALLLGEPISLGILLGMFLILIGLYSFLWGKGKETQCMLQASGEVSTTMAAESAGVHSTATVVPSFSPRHAVLRVEKNDRN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1167 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Gso6g1167 374 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016021|GO:0022857
Gso6g1167 374 Pfam EamA-like transporter family 14 147 IPR000620 GO:0016020|GO:0016021
Gso6g1167 374 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Gso6g1167 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 326 - -
Gso6g1167 374 PANTHER WAT1-RELATED PROTEIN 11 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1167 Gso-Chr6 11375842 11381814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1167 11 374 Nodulin-like Gene Family AT5G07050 30.400 4.99e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1167 - - gmx:100780316 732.635