Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1161 ATGTCTCCAGGTCCTGTTGTCGACGCTTCCCCTGAGGTTGAAGCAGAGCAACAACTTCCCTCCGTCGATGACGCAACCCAGTTGAAGAAATCCCAACCGCAGGAGGATGATGCTCCCGTTGTCGAGGACGTGAGGGATGATGACAAGGACGACGACGATGAGGACGACGACGACGATGATGAAGATGACAAGGAAGACGATGCTCTAGGTGGTGCTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGTCGAAAAGCAATGTTGAAGCTGGGACTAAAACCTGTCACCGGTGTTAGTAGGGTCACAATCAAGAGAACAAAAAATATTCTTTTCTTCATCTCCAAACCTGATGTCTTCAAGAGTCCAAATTCTGAGACCTATGTCATATTTGGTGAGGCGAAAATAGAGGACTTGAGCTCTCAGTTGCAGACACAGGCTGCTCAACAGTTCAGGATGCCAGATATGGGATCTGTAACGGCAAAACAAGAAGATGCTGCAGCTGCAGCAGTGCAACCTGAAGAAGAGGAGGAGGTTGATGAAACTGGTGTGGAGCCCCATGACATTGATTTGGTGATGACGCAGGCAGGAGTGTCAAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACAACGGGGACATTGTTGGAGCCATCATGGAACTCACTACTTAA 672 0.4911 MSPGPVVDASPEVEAEQQLPSVDDATQLKKSQPQEDDAPVVEDVRDDDKDDDDEDDDDDDEDDKEDDALGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVTAKQEDAAAAAVQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1161 223 CDD UBA_NAC_euk 186 222 - -
Gso6g1161 223 Gene3D - 87 140 IPR038187 -
Gso6g1161 223 MobiDBLite consensus disorder prediction 40 68 - -
Gso6g1161 223 SMART NAC_2 81 137 IPR002715 -
Gso6g1161 223 Pfam HYPK UBA domain 183 222 IPR044034 -
Gso6g1161 223 ProSiteProfiles NAC A/B domain profile. 78 143 IPR002715 -
Gso6g1161 223 MobiDBLite consensus disorder prediction 1 86 - -
Gso6g1161 223 Gene3D - 184 221 - -
Gso6g1161 223 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 19 222 - -
Gso6g1161 223 MobiDBLite consensus disorder prediction 69 86 - -
Gso6g1161 223 Pfam NAC domain 81 136 IPR002715 -
Gso6g1161 223 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 19 222 IPR016641 GO:0005854
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1161 Gso-Chr6 11333614 11336249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1161 K03626 - gmx:100807402 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1907 4 49282378 49284858 Gso6g1161 6 11333614 11336249 GST