Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1158 ATGGGTTCAACAGGCGAGACTCAGATTACTCCAACTTATGTGTCCGATGAAGAGGCAAACTTATTCGCCATGCAACTAGCCAGTGCCTCTGTACTCCCTATGGTTCTCAAATCAGCTCTTGAACTTGATCTGTTGGAAATCATAGCCAAGGCTGGCCCTGGTGTTCACCTTTCCCCCACTGACATTGCTTCTCAGCTCCCAACACACAATCCTAACGCACCCGTGATGTTGGACCGCATATTGCGGCTCTTGGCTTGCTACAATATCCTTTCTTTCTCTCTTCGCACTCTCCCTGATTGCAAGATTGAGAGGCTCTATGGGCTCGCCCCAGTTGCTAAGTATTTGGTCAAGAATGAAGATGGTGTCTCCATTGCTGCGCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTATTTGAAAGATGCAGTCCTTGAAGGAGGCATTCCATTTAACAAGGCTTATGGAATGACAGCCTTTGAGTACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGGATGGCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGTTTTGGCGGTCTTAAATCTCTAGTTGATGTTGGTGGTGGGACTGGAGCGATAATCAACATGATTGTCTCAAAGTATCCCACTATTAAGGGCATTAATTTTGATTTGCCTCATGTCATTGAAGATGCCACATCTTATCCAGGAGTGGAGCATGTCGGCGGAGATATGTTTGTGAGTGTTCCGAAAGCTGATGCTATTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAGCATTGCTTGAAGTTTTTGAAGAACTGCTATGAGGCACTTCCAGACAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCGGTGGCTCCAGACTTTAGCTTGGCCACAAAGGGTGTAGTTCACATTGATGTGATCATGTTGGCTCATAATCCAGGTGGAAAAGAGAGAACAGAGAAAGAGTTTGAGGCTTTGGCCAAAGGATCAGGATTCCAAGGTTTCCGAGTCCACTGTTGTGCTTTCAATACCTACGTAATGGAATTTCTCAAAAAGGAGGTTTAA 1101 0.4505 MGSTGETQITPTYVSDEEANLFAMQLASASVLPMVLKSALELDLLEIIAKAGPGVHLSPTDIASQLPTHNPNAPVMLDRILRLLACYNILSFSLRTLPDCKIERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFGGLKSLVDVGGGTGAIINMIVSKYPTIKGINFDLPHVIEDATSYPGVEHVGGDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDFSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVHCCAFNTYVMEFLKKEV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1158 366 SUPERFAMILY "Winged helix" DNA-binding domain 16 119 IPR036390 -
Gso6g1158 366 CDD AdoMet_MTases 204 295 - -
Gso6g1158 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 361 IPR029063 -
Gso6g1158 366 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Gso6g1158 366 PANTHER BNAA10G07270D PROTEIN 1 364 - -
Gso6g1158 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Gso6g1158 366 Gene3D - 1 115 IPR036388 -
Gso6g1158 366 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Gso6g1158 366 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Gso6g1158 366 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Gso6g1158 366 PIRSF O-mtase 2 363 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1158 Gso-Chr6 11312774 11314996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1158 1 364 Monolignol Biosynthesis Gene Families AT5G54160 77.747 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1158 K13066 - gmx:100777636 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1910 4 49294896 49296980 Gso6g1158 6 11312774 11314996 GST