Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1157 ATGGGTTCAACAGGTGAGACTCAGATTACCCCAACCCACGTATCTGATGAAGAAGCAAACCTTTTCGCCATGCAACTAGCCAGTGCTTCTGTCCTTCCAATGATCCTCAAATCAGCACTTGAGCTTGATCTGTTGGAAATCATAGCCAAGGCTGGCCCTGGTGTTCATCTTTCCCCCACTGACATTTCTTCTCAGCTCCCAACACAGAACCCTGATGCACCCGTTATGTTGGACCGTATATTGCGCCTATTGGCTTGCTACAATATCCTCTCTTTTTCTCTCCGCACTCTCCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTCGCCCCCGTTGCCAAGTACTTGGTTAAGAACGAAGATGGTGTCTCCATTGCTGCGCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTATTTGAAAGATGCAGTCCTTGAAGGAGGCATTCCATTTAACAAGGCTTATGGAATGACAGCCTTTGAGTACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGAATGGCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGTTTTGAGAGTCTTAAATCTCTGGTTGATGTTGGTGGTGGGACTGGAGCTGTAATCAACATGATTGTCTCAAAGCATCCCACTATTAAGGGCATTAATTTTGATTTGCCTCATGTCATTGAAGATGCCCCATCTTATCCTGGAGTGGAGCATGTAGGTGGAGATATGTTTGCGAGTGTTCCGAAAGCTGATGCTATTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAGCACTGCTTGAAGTTTTTGAAGAACTGCTACGAGGCACTACCAGACAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCAGTGGCTCCAGACTCTAGCTTGGCCACAAAAGGTGTGGTTCACATCGATGTGATCATGTTGGCACATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGGTCTGGATTCCAAGGTTTCCGAGTTGTTTGCTGTGCTTTCAATACCAACATCATGGAATTTCTCAAAAAGATTTAA 1098 0.4545 MGSTGETQITPTHVSDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGVHLSPTDISSQLPTQNPDAPVMLDRILRLLACYNILSFSLRTLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFESLKSLVDVGGGTGAVINMIVSKHPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFASVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVVCCAFNTNIMEFLKKI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1157 365 PANTHER BNAA03G48770D PROTEIN 1 364 - -
Gso6g1157 365 CDD AdoMet_MTases 204 295 - -
Gso6g1157 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Gso6g1157 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Gso6g1157 365 Gene3D - 1 115 IPR036388 -
Gso6g1157 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Gso6g1157 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Gso6g1157 365 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Gso6g1157 365 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Gso6g1157 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 360 IPR029063 -
Gso6g1157 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1157 Gso-Chr6 11305658 11309112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1157 1 365 Monolignol Biosynthesis Gene Families AT5G54160 78.082 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1157 K13066 - gmx:100805999 738.413