Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1135 ATGGGGATCCTTAGCGATCATCATCATAATCAGAAGCATCATCACCGCCGCCACCACCACCATCATCATCACATGAGTTTTCATTTGCACATTCCTCACCTTCACTTTCACCACCACCACCAACATGAGAAGAAGGAGGATCTGAAGGACATTCCAAAAGGGTGTTTGGCGATCTTGGTAGGGCAAGGAGAGGAGCAACAGAGGTTTGTGGTCCCTGTGATGTACATGAACCACCCATTGTTCATGCAGTTGCTCAAAGAAGCTGAAGAGGAGTATGGCTTCGATCAGAAAGGCCCCATAACCATTCCTTGCCACGTGGAGCACTTTCGCACCGTCCAAGGCTTGATTGATAGGGACAAATCTCTCCACCATGGTCAACACCACCACCATGCTTGGTGCTTCAAAGTTTGA 411 0.4866 MGILSDHHHNQKHHHRRHHHHHHHMSFHLHIPHLHFHHHHQHEKKEDLKDIPKGCLAILVGQGEEQQRFVVPVMYMNHPLFMQLLKEAEEEYGFDQKGPITIPCHVEHFRTVQGLIDRDKSLHHGQHHHHAWCFKV* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1135 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 132 IPR003676 GO:0009733
Gso6g1135 136 Pfam Auxin responsive protein 43 112 IPR003676 GO:0009733
Gso6g1135 136 MobiDBLite consensus disorder prediction 1 25 - -
Gso6g1135 136 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 30 132 - -
Gso6g1135 136 MobiDBLite consensus disorder prediction 8 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1135 Gso-Chr6 11098394 11099411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1135 50 110 Calmodulin-binding Proteins AT5G20810 55.738 2.46e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1135 K14488 - gmx:100526867 216.468