Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1086 ATGTATGCAGAGACTGGTCTTTTCTTCCCATATTTGCACAACGTCTCTCACGGCCTTCATCAGCTTGAGGAGTACTGCAAAACCCAGAAGTCCAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCTGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACATGTCAGCGGCCATCTCAATGATGTCTTGTGGGGAAGATGTCTCGTCACAGGGACTAAAGTCCACTGATATTGATATTCTTCAAAATGATCAGTTTCTGAGTGAGGTGTTCTATGAATGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCATTCTCTGAGATTCTGGAAATCAAGGTTCCTTTTCTGAACATTGATGAGAACACAATTCAAGAAAACAAGCCATTTACTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCAATGAAGCCTGCTTTCATTGATATCTCTGCAATAGATTTCAATGCAGATTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCTTGAGAGGCCCCTTCTTATCAGCAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCACTTGCTGACAGTCAGCCAAGAATCCGTGGAAGATTTGCAAGGACTGAAGAATCTGATGTCAAGAGGGAATGA 837 0.4313 MYAETGLFFPYLHNVSHGLHQLEEYCKTQKSNASMDDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPIMDMSAAISMMSCGEDVSSQGLKSTDIDILQNDQFLSEVFYECEKDLLEKAAIESPFSEILEIKVPFLNIDENTIQENKPFTDMQLAKSVSSGSLSSMDWMRGAAMKPAFIDISAIDFNADYGMRRSFSEGDIKTLGNGNMNIVQSPLERPLLISNCTSEERFQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDVKRE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1086 278 PANTHER CCT MOTIF FAMILY PROTEIN 27 276 - -
Gso6g1086 278 Pfam CCT motif 228 270 IPR010402 GO:0005515
Gso6g1086 278 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
Gso6g1086 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1086 Gso-Chr6 10584446 10589540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1086 224 274 C2C2-CO-like Transcription Factor Family AT5G57660 47.059 7.88e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso6g1086 CCT 4.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1086 - - gmx:100820570 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1979 4 50077844 50083066 Gso6g1086 6 10584446 10589540 GST