Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1071 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGAGAATATGTTGGTGCAAAGAAGTTTGCTCTCAAGGCTCAAAATCTGTATCCTGAGTTGGAGGATATTACCCAGCTTTTGACAACAATTGATATTTACATATCCGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGACTGTTAGAAAGCAATACAGAAAGCTGGCTCTCACTCTTCATCCTGACAAAAACAAGTCTTTGGGTGCTGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTTGAAAGGATTCCAACATAATAATCCCAACCATGTTGGATCTCAATCGGATGCACCCAGTTCAAATGGTTATTATAATCTAAAGAAGAATGCAACTTCAAATGTCAGGGCAGGAAAGAATAATGGTCGGGCACCTTCAGCTCCGGTTAAAAAGGTTGAAACCTTTTGGACTATCTGTAATAGGTGCAGGACACATTATGAATATCTCAGGGTTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCCGTAGAGAGGGGTCCACCACCAAATGTTTTTAAGCCACCAAATTGGTCTTCTCATCAACGGCATCAGAATTCTCAACACCATGCTGGAAGTAATAATACAAATTTTCAGTGGGGTTCTCACTCTAGAATGGCTGGTTTTGGTAGCACAGATGGATCAACATCTGTTGCAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAGAGTAAGGAGGGAAGGTTCTTTTCACAAAGCTGAAAAACCTATGAAGAAAAGGAAGACAGATGATATTTGCATTAATGGTTATCAAGGATACATGGCAAATCATATGGCTACAGGACATGGAGCGGCTGGTTTGGGCACCTTTTCTGAACCAGGAAAGGCTAACTTGGAAACAGAAAGGAATTATGGTTTTTCAGGTCTTCCTGGCAAGCATTACAGCACAAGAGAATTGTCAATGTTTGAAATACGAAACATGTTGATGGATAAGTCACGCATTGAAATTCGTGAGAAACTTCAAGAATGGAAATTGATGGCTGAAGCTAAGATTAACAAGGACAAAGAGAATAAAAGACAGAAAAGCACATTTAATGGCAAACCAACTGGTTCAGAGAAGCTGAGAGAGACTGCTGTTAATGGTAACAGGCATCTGGACATTGATTCTTTCCCTGTCAGAACTGATGATACAGTTAAGAAGAGCCAAACTTATGTTACAATCAATGTTCCAGACCCTGATTTTCATAATTTTGACTTGGATAGAGATGAAAATTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGATGACGATGATGGAATGCCTCGTTATTATGCTAAAATTCACAAGGTGATCTCCATGAAGCCATTTAAAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGCTCTGGTTTTTATAAAACTTGCGGGGATTTCAGAACTGGCAAGCATGAAATAACTGAATCATTAAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCACAAGAGGTGTTGTTCGAATCTTTCCTGGAAAAGGGGAGGTCTGGGCTCTTTACAGAAACTGGTCTCCTGATTGGAATGAACATACCCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCGATGAAGAGCAAGGCATATTAGTTACCCCCCTTGTTAAGGTTGCTGGTTTTAGGACTGTGTTTCAAAGGCACATGGACTGTGATCAGGAGAGGAGGATTCTTAAAGAGGAAATGTTTCAATTCTCTCATCAGGTTCCTAATTACTTGCTTACTGGCCAAGAAGCTGATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCTACTCCTTTAGACCTCCTCCAGATAGCAACAGAAGCTAACGAGACAACGGATAATGCTTAG 2079 0.4122 MMECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPELEDITQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNNPNHVGSQSDAPSSNGYYNLKKNATSNVRAGKNNGRAPSAPVKKVETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPPNWSSHQRHQNSQHHAGSNNTNFQWGSHSRMAGFGSTDGSTSVAAQAASVVQQASERVRREGSFHKAEKPMKKRKTDDICINGYQGYMANHMATGHGAAGLGTFSEPGKANLETERNYGFSGLPGKHYSTRELSMFEIRNMLMDKSRIEIREKLQEWKLMAEAKINKDKENKRQKSTFNGKPTGSEKLRETAVNGNRHLDIDSFPVRTDDTVKKSQTYVTINVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYAKIHKVISMKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLEDFDEEQGILVTPLVKVAGFRTVFQRHMDCDQERRILKEEMFQFSHQVPNYLLTGQEADNAPKGCRELDPAATPLDLLQIATEANETTDNA* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1071 692 Gene3D DnaJ domain 64 174 IPR036869 -
Gso6g1071 692 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso6g1071 692 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso6g1071 692 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso6g1071 692 MobiDBLite consensus disorder prediction 230 303 - -
Gso6g1071 692 PANTHER HEAT SHOCK PROTEIN-LIKE 2 688 - -
Gso6g1071 692 SMART dnaj_3 66 123 IPR001623 -
Gso6g1071 692 CDD DnaJ 67 120 IPR001623 -
Gso6g1071 692 MobiDBLite consensus disorder prediction 233 285 - -
Gso6g1071 692 PANTHER BNAC03G44070D PROTEIN 2 688 - -
Gso6g1071 692 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Gso6g1071 692 Pfam Domain of unknown function (DUF3444) 452 658 IPR024593 -
Gso6g1071 692 SUPERFAMILY Chaperone J-domain 57 127 IPR036869 -
Gso6g1071 692 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gso6g1071 692 Pfam DnaJ domain 67 128 IPR001623 -
Gso6g1071 692 MobiDBLite consensus disorder prediction 133 159 - -
Gso6g1071 692 MobiDBLite consensus disorder prediction 400 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1071 Gso-Chr6 10431050 10436481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1071 5 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.739 1.64e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1071 - - gmx:100814722 1422.91