Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1041 ATGGGGAAGTTGACTCTTCCGTTTGTGGGAATGATTATGGCAGAGTTTGCTCAGGTTGGGTTAATCATACTGAGCAAACAAGTCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACTCAATCGGTGCTCTCCTCCTTCTTCCCATTTCCTTACTTATACACAGATTTGAACGTCCTCCAATCACCTTTTCCACCCTTTGTGGATTCTTCTTACTTGCACTACTCGGGCTTTTGGGTATGCTGGGATTTACTACGGCTCAGCTACACTCAGCACGTCCATACTCAACCTCGTTCCTGGTTTTACTTTCATACTTGCTGTTCTTTTTAGGTTTATTTCTTGCGGCTGATTGTGTAATGGCTTCAGCATATATTATTGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCTGTTTGGTTGTGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCTAAGCTAAGGTTGCTTGCAGTTTTATACTCGGGAGTCTTTGGCTCTGCATTTCAAGTTGGTATTATTTGTTGGTGTTTGCACCAGACAGGACCGGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATACTCATATCAGTGGTTTTAGGTGTTCTCTTCCTCGGGGATGCATTCTATCTTGGAAGTCTGATAGGTGCTACCGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGGAAAGCCAAAGATATTGAAGATGCTGGACTCAGCTTGGAGTCAAAGGGCAAACAGGCCCCACTTTTGGAGGAAAACAGCCATGAAGACATACAAGGGCATTAG 858 0.4254 MGKLTLPFVGMIMAEFAQVGLIILSKQVMAQGMTNFIFIFYSNSIGALLLLPISLLIHRFERPPITFSTLCGFFLLALLGLLGMLGFTTAQLHSARPYSTSFLVLLSYLLFFLGLFLAADCVMASAYIIVQASILKKYPAELIVVFFYCFFVAIQSAVTCLVVERDISAWSLEPKLRLLAVLYSGVFGSAFQVGIICWCLHQTGPVFVSMFKPLGILISVVLGVLFLGDAFYLGSLIGATVIVVGFYSVLWGKAKDIEDAGLSLESKGKQAPLLEENSHEDIQGH* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1041 285 PANTHER WAT1-RELATED PROTEIN 112 260 IPR030184 GO:0016021|GO:0022857
Gso6g1041 285 PANTHER WAT1-RELATED PROTEIN 8 113 IPR030184 GO:0016021|GO:0022857
Gso6g1041 285 SUPERFAMILY Multidrug resistance efflux transporter EmrE 169 254 - -
Gso6g1041 285 Pfam EamA-like transporter family 116 250 IPR000620 GO:0016020|GO:0016021
Gso6g1041 285 PANTHER WAT1-RELATED PROTEIN 112 260 - -
Gso6g1041 285 PANTHER WAT1-RELATED PROTEIN 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1041 Gso-Chr6 10128274 10131247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1041 6 86 Nodulin-like Gene Family AT5G40240 39.506 3.32e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1041 - - gmx:100804932 333.569