Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1035 ATGAAAAGGTGTTGGTTGGTTGGGGTCTTGATTGTGGTGGGGTGTGCCTGCATGTTGGGCACTGTTGGAGTTGAAGGGCACCCTGATGAGGATCTCATAGTAAGTTTACCTGGCCAACCCAAAGTTGAGTTCAAGCAATATGCAGGGTATGTTGATATTGATGTCAAACATGGGAGAAGCCTCTTCTACTATTTTGTGGAGGCTGAGAATGTTCCTGACAAGAAGCCTCTCACTCTTTGGCTCAATGGAGGCCCGGGATGTTCCTCCATTGGAGGAGGTGCCTTCACTGAGTTGGGTCCCTTTTATCCCAAAGGTGATGGACGTGGTCTCCGAACAAATTCAATGTCTTGGAATAAAGCATCCAACCTCCTCTTTGTGGAGTCCCCAGCTGGAGTTGGTTGGTCATACTCAAACACAACTTCAGATTACAATTCTGGAGACTCGTCCACAGCCACTGATATGCTTCTGTTCTTGCTGAAATGGTACCAGAAGTTTCCTTCCTACAGATCAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTATATACCACAGTTAGCTAATGTTCTTTTGGACTACAATGTTCATTCAACTAGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTGATCGTGATGCACAAGCAACATATGAATACTTCTGGTCACATGGAATGATTTCAGATGAAATTGGCCTAGCCATTACGAATGATTGCGATTTTGATGATTATGTCTTTGCAAGTGCACATAATATGTCTAAATCATGCAATGAAGCAATAAATGAAGCAAATGAAATCGTTGGCGATTATATAAACAACTATGATGTGATTTTGGATGTTTGTTATCCATCCATAGTTGAACAAGAATTGAGATTGAAAAAGATTGCTACTAAAATAAGCATAGGTGTAGATGTCTGTATGACTTATGAAAGAAGTTTTTATTTCAACCTCCCTGAGGTTCAGAAGGCTCTCCATGCAAACCGTACCAATCTTCCGTACCAATGGTCCATGTGCAGTGGTGTCTTAAATTATAGCGACACTGATCCTAACATAGATATCCTTCCAATTCTTAAAAAGATTGTTCAAAACCATATTCCAGTTTGGGTATTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTAATTCGTGAACTAGCTCATGATCTTAAGTTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACCGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGAGGAGCTGCTCACATGGTACCCTATGCACAACCTTCAAGAGCACTCCATCTTTTCAGTTCATTTGTGCATGGAAGGAGATTGCCAAATACAACAAGTCCTTCAATTGATGATTAA 1422 0.4128 MKRCWLVGVLIVVGCACMLGTVGVEGHPDEDLIVSLPGQPKVEFKQYAGYVDIDVKHGRSLFYYFVEAENVPDKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRTNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNSGDSSTATDMLLFLLKWYQKFPSYRSRELFLTGESYAGHYIPQLANVLLDYNVHSTSFKFNIKGVAIGNPLLKLDRDAQATYEYFWSHGMISDEIGLAITNDCDFDDYVFASAHNMSKSCNEAINEANEIVGDYINNYDVILDVCYPSIVEQELRLKKIATKISIGVDVCMTYERSFYFNLPEVQKALHANRTNLPYQWSMCSGVLNYSDTDPNIDILPILKKIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNTTSPSIDD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1035 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gso6g1035 473 PANTHER CARBOXYPEPTIDASE 6 467 - -
Gso6g1035 473 SUPERFAMILY alpha/beta-Hydrolases 29 463 IPR029058 -
Gso6g1035 473 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Gso6g1035 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 467 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 Gene3D - 361 460 - -
Gso6g1035 473 Gene3D - 314 350 - -
Gso6g1035 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Gso6g1035 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1035 Gso-Chr6 10085939 10089917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1035 321 463 Calmodulin-binding Proteins AT2G22960 26.027 3.51e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1035 K16297 - gmx:100803335 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2016 4 50506453 50510406 Gso6g1035 6 10085939 10089917 GST