Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1025 ATGCGAATTCAGAAACCCCAAGTGGAAAGTTCGAGCCTTTTCGTTCCTTCTCAGTTCGTTGATCAGTTCCCAGATTCTGTTACTGTTCAATTTCGCAATTTTCAACTCTCGGTGAGTCATGGTGATTGCTTGAAGACCGTGATATCGAAAAAGATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCGCCTTCTCTTTTAAGATCGAATTCGGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCACCACAGTCGTCTTTCCCTTCACTCGTCTCACCACGCACTCAGTTCAACAATATGAACATTCTGGGAAATATGTCCAATGTGACTTCCATACTGAATCAGTCTTTCCCAAATGGAGTTCCGAATCCCGGGCTCTCTGGTCCAGGAAGCAGCCAGCGTGGAGCAATTGATACTGGAGCTGAAACAGATCCGCTCTCCAGTGTTGGAAATGGAATGAGCTTCAATAATTCTTCATCCACATTTGTACAGTCAAGTATAGTGAATGCTGCTTCCTCTGGTCAAGGTCAGGGACAACAATTTTCTAACCCTTCCAGTAACCAGCTGTTGCCAGATCAACAGCATTCCCAACAGCTTGAACCTCAAAATTTCCAACACGGTCAGCAGTCAATGCAACAGTTCTCTGCCCCTCTGAATACACAGCAACCGCCGCAGCCACAGCCGCATTTTCAATCAATTCGGGGAGGGATAGGTGGTATGGGACCAGTAAAGCTAGAGCAGGTAAGCAACGATCAACTTGGACAACAGCAGCAGCAGCAGTTGCAATCCTTGAGGAATCTTGCTTCAGTGAAGTTGGAACCACAACAAATGCAGACGATGAGAACTCTGGGACCTGTTAAAATGGAGCCTCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAGCAACAACAGCAGCAACAACAGTTTCTCCACATGTCAAGTCAATCGTCTCAGGCTGCTGCTGCCCAGATCAATCTTTTGCGCCATCACCGGCTTTTACAGTTACAACAACAACACCAGCAGCAACAGCTCTTGAAGGCAATGCCTCAACAAAGGTCCCAACTACCACAACAATTTCAACAGCAGAATATGTCTATGAGATCTCCTGCGAAGCCAGCATATGAACCAGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAATAATATTGAGTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCAATGTATGGAAGTGGGAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAGCCTGGCCGTGGATTTGAAGCAACTGTTGAGGTTCTTCCACGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTTTTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAACTCATACCCAGGAGATTGTTGATACCACAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGTCTTTTACTCAAAATGCAACACCCAATGTATCTGTTCCAGAATTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGTTAAAGCCTTAGAAGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAACTGGGACTGGACCTATGGAGAGCTTAGCAAAATTCCCTAGGAGAACAAGTGGTTCAGCTGGACCTCGTGGTCAAGCACAACAGCATGAAGAACAATTACAGCAGCAGCAACAACAACAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTACGAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTTAGTGTAAATAACTCTGTCAACCCAGCATCCACATCAACAACCACAAGCACTATTGTTGGTCTTCTTCACCAGAACTCTATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCTTCCCCAGGTTCCTCCAGTACAGTGCCACAAGGCCAGCCAAACTCGTCCCCTTTTCAATCACCAACACCGTCCTCTTCTAACAACCCCCCACAAACATCTCACCCTGCTTTAACATCTGCCAATCACACAAGTACGACAAACTCACCAGCTAATATTTCCATGCAACAACAGCAGTCATCTATTTCTGGTGAACCTGACCCTAGTGATGCTCAAAGCTCAGTCCAGAAAATCATACATGAGATGATGATGTCCTCCCAGATTAATGGCAATGGTGGAATGGTCGGTGTTGGATCTCTTGGAAATGATGTGAAGAATGTAAGTGGTATTCTGCCAGTGAGTGCCAATACAGGGCTAAATGGTGGCAATGGCTTGGTGGGTAACGGCCCAATGAACAGTAATTCAGGCGTTGGGGTTGGTAATTATGGCACAATGGGTCTTGGTCAATCCGCTATGCCTAATGGAATCAGAACTGCTATGGTAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCGTCTCTTGCCCGGGATCAAGCTATGAATCATCAACAAGATCTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTTGGTGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2886 0.4459 MRIQKPQVESSSLFVPSQFVDQFPDSVTVQFRNFQLSVSHGDCLKTVISKKMVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPPQSSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGSSQRGAIDTGAETDPLSSVGNGMSFNNSSSTFVQSSIVNAASSGQGQGQQFSNPSSNQLLPDQQHSQQLEPQNFQHGQQSMQQFSAPLNTQQPPQPQPHFQSIRGGIGGMGPVKLEQVSNDQLGQQQQQQLQSLRNLASVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQQFLHMSSQSSQAAAAQINLLRHHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMSMRSPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSFTQNATPNVSVPELQNNCNMFVASARQLVKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSAGPRGQAQQHEEQLQQQQQQQMVAHNSNGDQNSVRAAAMQIASSNGMVSVNNSVNPASTSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPQGQPNSSPFQSPTPSSSNNPPQTSHPALTSANHTSTTNSPANISMQQQQSSISGEPDPSDAQSSVQKIIHEMMMSSQINGNGGMVGVGSLGNDVKNVSGILPVSANTGLNGGNGLVGNGPMNSNSGVGVGNYGTMGLGQSAMPNGIRTAMVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVGGFNNLQFDWKPSP* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1025 961 PANTHER LIM DOMAIN-BINDING PROTEIN 52 960 IPR029005 -
Gso6g1025 961 MobiDBLite consensus disorder prediction 632 684 - -
Gso6g1025 961 MobiDBLite consensus disorder prediction 653 684 - -
Gso6g1025 961 MobiDBLite consensus disorder prediction 119 158 - -
Gso6g1025 961 MobiDBLite consensus disorder prediction 176 234 - -
Gso6g1025 961 Pfam LIM-domain binding protein 388 642 IPR029005 -
Gso6g1025 961 MobiDBLite consensus disorder prediction 176 249 - -
Gso6g1025 961 MobiDBLite consensus disorder prediction 729 823 - -
Gso6g1025 961 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 52 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1025 Gso-Chr6 9974920 9983902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1025 52 957 C2H2 Transcription Factor Family AT1G43850 60.423 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1025 - - gmx:100799771 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2024 4 50602912 50612925 Gso6g1025 6 9974920 9983902 GST