Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1023 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCTACATCATATGAAAATGCTAAGCTCTTCTCACTGAAGGGAACTGATGTTAGACCAGGCCTGTCCTCCCAAATTTTTGATCCTGATAAGCATAGGAGCATGTACATGACCGATGCTTACTCCGGCGAGGGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAACTGATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCACCCTGATGTAGCCTCTTCTTACCAGCTCAGAGCCAGTTCAGGAGCTTCTATGGTTGCCAATAACCCGTCTGATTCTTCTTTCATGTCTACAAGGCATCATGATGCTTACCAGTCAAACTCAGGATCAGATTTGATGGAGAACGGAAGCCTGGATTCACGCGACGATGAAGGTCTAATGAGATTAAGACTAAAAGCACTGGAGAGGGCATTGCTTGATGATAGTGATGCTGGGGAGGATGAAGAGGAGGAGGAGGAGGAAGAGGAAGACATATTTGAGGCTGCACAAAGCATGGAAATTGATCCTGACATTGCTGAGTGGGCTGATTCAATGCATAATATGCTGCTCCATGGTTCACCAAAGGAGTCCTCTTCTTCAGATTCCAATACCAGCAGCATCAGCAGCACCAAAGAAATATCACAAACTTCTCAGACCCCCAAGAAGTTGCTTTATGAATGTGCTATTGCACTTTCTGAAGGAAATGAAGTGGAAGGATCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAGGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTGGCCGAATCCGGAAAAAGTATTTACAAAGCTCTGAGATGCAAGGAGCCTCCAACTTCAGATCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTCATTGCTGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAAGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTACATAAATCTAATCCAAACACTTGCTTCAAGGTCAAGCAAGCCACCACATGTTAGGTTGACTGGAGTTGATGATCCAGAATCTGTGCAGCGATCTGTTGGAGGCCTACGGAACATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTTGGTTTGCCATTTGAGTTTCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCAACTGCAGTCCTGATGAAGCACTAGTGGTAAACTTTGCATTCCAGCTTCATCACATGCCCGATGAGAGTGTTTCGACAGTAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCCTGAATCCAAAGCTTGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAGGCCTACAATTACTACTCTGCTGTGTTTGAGTCACTTGATGCTACTCTTCCTAGAGAAAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCGTGTGAGGGCGAGGATAGAATAGAGCGGTATGAAGTTGCTGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCAATGAGCACAAATGTCACCGATGAAATCCGAAAACTCATTAAGACGGTGTATTGCGACAGGTACAAGATTAAGGAGGAAATGGGAGCGCTTCACTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTTACCAAGATAA 1803 0.4448 MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFDPDKHRSMYMTDAYSGEGYEKYFHDSQTEELIEPSSSSISGSSIHPDVASSYQLRASSGASMVANNPSDSSFMSTRHHDAYQSNSGSDLMENGSLDSRDDEGLMRLRLKALERALLDDSDAGEDEEEEEEEEEDIFEAAQSMEIDPDIAEWADSMHNMLLHGSPKESSSSDSNTSSISSTKEISQTSQTPKKLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPTSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLRNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRKLIKTVYCDRYKIKEEMGALHFGWEDKNLIVASAWKLPR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1023 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 598 IPR005202 -
Gso6g1023 600 MobiDBLite consensus disorder prediction 195 221 - -
Gso6g1023 600 Pfam GRAS domain family 228 597 IPR005202 -
Gso6g1023 600 ProSiteProfiles GRAS family profile. 217 597 IPR005202 -
Gso6g1023 600 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 598 IPR030011 GO:0003700|GO:0005634
Gso6g1023 600 MobiDBLite consensus disorder prediction 152 172 - -
Gso6g1023 600 MobiDBLite consensus disorder prediction 197 221 - -
Gso6g1023 600 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1023 Gso-Chr6 9965582 9969299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1023 1 597 GRAS Transcription Factor Family AT1G21450 60.732 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso6g1023 GRAS 1.5e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1023 - - gmx:100798897 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2026 4 50618091 50621847 Gso6g1023 6 9965582 9969299 GST
Gso14g1279 14 34219035 34222962 Gso6g1023 6 9965582 9969299 PCT
Gso13g0210 13 11601733 11605579 Gso6g1023 6 9965582 9969299 PCT
Gso6g1023 6 9965582 9969299 Gso14g1279 14 34219035 34222962 PCT
Gso6g1023 6 9965582 9969299 Gso13g0210 13 11601733 11605579 PCT