Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1021 ATGTCTCAGGGAAGAGGCAGTGCATCTTTGCCTATTGTGGTCACTGTGGTTTCACTACTGTGCCTTTTGGAACGTGCTAACGCAGCAACTTACTCCGTTGGAGGACCTGGGGGATGGACCTTCAACACTAATGCTTGGCCCAATGGAAAAAGATTCAGAGCTGGTGATGTCCTAATCTTCAACTATGACTCAACGACCCACAATGTGGTTGCTGTGGACAGAAGTGGATACAACAGCTGCAAGACACCAGGGGGTGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAAACTAGCAAGAGGGCAGAACTACTTCATATGTAACTACCCTGGTCACTGCGAATCTGGGATGAAAGTTGCCATTAATGCGCTGTGA 375 0.48 MSQGRGSASLPIVVTVVSLLCLLERANAATYSVGGPGGWTFNTNAWPNGKRFRAGDVLIFNYDSTTHNVVAVDRSGYNSCKTPGGAKVFSSGKDQIKLARGQNYFICNYPGHCESGMKVAINAL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1021 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Gso6g1021 124 Pfam Plastocyanin-like domain 39 117 IPR003245 GO:0009055
Gso6g1021 124 PANTHER BASIC BLUE-LIKE PROTEIN 5 122 - -
Gso6g1021 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Gso6g1021 124 SUPERFAMILY Cupredoxins 29 123 IPR008972 -
Gso6g1021 124 PANTHER BLUE COPPER PROTEIN 5 122 IPR039391 GO:0009055
Gso6g1021 124 CDD Plantacyanin 29 123 IPR041844 -
Gso6g1021 124 Gene3D - 29 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1021 Gso-Chr6 9938118 9939349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1021 1 124 Phytocyanin Superfamily AT1G17800 42.446 9.05e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1021 - - gmx:100305588 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2028 4 50655336 50656713 Gso6g1021 6 9938118 9939349 GST