Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1000 ATGCAATTGTACCATCATCCATTTGATTTGGACTCCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAGGCATTGATTATACATCTCACCATGCCAATCCCATAACTGGCAAGAACTTGGATTCTTCATTCTTCAACATGAATCCCGGTGGAAGACTCCCTGTTTTCCAAAATGGGTCTCACATCCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGTTCTCCTCAGGGTCTGAGAATATCAGTAGCAGTAGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAAGTATTTTTCCCTTTCCCATATACCAGAGAAATACAGGATATACGTTTCCAAGTTCTTAAGGCGAGTGGTGATTGCTCGAATGTCCGAGTCCCCAGAATTAGCGGGTGCTTACCATAAGAAGTTAAAAGAAGCCTATCAGACTGAAGAGAAATTGAAAGAGGCAGCTGTATTGAGAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAGGCAGCTGAGTGAAACACCTTATTTAGCAGGTGAAGAGTTTACCATGGCGGATGTCATGCTCATTCCGGTGTTGGCTCGTTTAGTACTCTTGGATTTGGAAAATGAGTACATAACTGGCAGGCCCAACATTGCTGAGTATTGGGTTTTTGTTCAGCAGAGGCCTAGTTATAGGAAGGTGATTGGTAGGTATTTTGATGGTTGGAAAAAACACAAGACATTGTTGAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.4216 MQLYHHPFDLDSQKVRLALEEKGIDYTSHHANPITGKNLDSSFFNMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISSSSREVIEWMQKIQEWDPKYFSLSHIPEKYRIYVSKFLRRVVIARMSESPELAGAYHKKLKEAYQTEEKLKEAAVLRRSKEHLIRLLDEAERQLSETPYLAGEEFTMADVMLIPVLARLVLLDLENEYITGRPNIAEYWVFVQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRIRSLLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1000 267 CDD GST_N_family 1 73 - -
Gso6g1000 267 CDD GST_C_family 148 225 - -
Gso6g1000 267 SFLD Glutathione Transferase (cytosolic) 2 226 IPR040079 -
Gso6g1000 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 252 IPR010987 -
Gso6g1000 267 Coils Coil 159 179 - -
Gso6g1000 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Gso6g1000 267 SUPERFAMILY GST C-terminal domain-like 157 239 IPR036282 -
Gso6g1000 267 Pfam Glutathione S-transferase, C-terminal domain 160 224 - -
Gso6g1000 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Gso6g1000 267 Gene3D Glutaredoxin 1 75 - -
Gso6g1000 267 Gene3D - 120 238 - -
Gso6g1000 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Gso6g1000 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1000 Gso-Chr6 9660966 9663871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1000 1 267 Glutathione S-transferase Gene Family AT1G77290 68.914 2.50e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1000 K22077 - gmx:100792543 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1225 14 29014554 29017527 Gso6g1000 6 9660966 9663871 PCT
Gso13g0184 13 10657371 10660310 Gso6g1000 6 9660966 9663871 PCT
Gso6g1000 6 9660966 9663871 Gso14g1225 14 29014554 29017527 PCT
Gso6g1000 6 9660966 9663871 Gso13g0184 13 10657371 10660310 PCT