Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0999 ATGGTTGAGATGGGGTCGTGTGGGAGATCTGCTGCCATTGATAATCCCTCAGAAAAGTTTATTATTGAGCAGCAGCAGCATTTGTGCTTAGAGGTTCAAGAGCAGGAGGTTGTTTCTGTTGTGCAGGAGTCTTGTTTAGAGGAAGAGGCTTGCAATGTGGTGGACTCTAATGTTGAGCTCTCCACTGTGATTGATGGTTGTCTGGGAGAGGACCGTGTCTGTTCCAAACGATGTGTTGATGTTACCGAGGGGTCCAGAGAGGGTTTGGGTTTGGGTTTGGTGAGTGAATGCGAAAATGCTGATTTGTTGCCACTGGAGAAATCTGCCGAAGATGATTGCCAGAATTATTTGGGGGTTTCTTGTGGGAGCATTGAAGTTCCCTGTGTAAACAGTGGCTCAGAGGGAAGATTTCTGGATGAGGGTAACTTTGATCTGCCTTCGGGGTCCTTAACTGCAGATGATTCACAGATGTATTGTGCTCAACTGGATGAGCAGAAGGATGATGAGTCATGGTCCTTAATTACTGATGATTCACAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGATGATAAGAGCGATGTATTGCCTGCAGCAGGAGATGATTTGGCTGTCGTGGAAGGCAAAAACGATGTCACTGGTGTTCTTGCTGATGCTTTCAGTCATGTACATGATTTCAGGGATTGCGAAGTGTCTTTGGAATCGGAATCCATGGCTGACTTGTTAGTTGATTGCAACTGGCAAAGTGAGCAGGAGGAAATTATGAGAAATACTGATCCCTTGTTGAATGTAGTGGAAAAATGTGACGCTCTAATTGTGGAGGAAACTGATGCTTGCAGGCAGATATCTCCTACACCGGCTATGGAAGTGCCATCAGGGGCACCATCAGGTGCATTATGTACAGATACTGAAGTAGAGAGCACAAGTGATCAGCCATGTGATCAGAAAGATGGTGAGGAAACTGATGTTTGCAGGCAGATATCTCCTACTCTGGCTATGGAAGTGCCATCAGGGGCATTTTGGACAGATACAGAAGTAGAGAGCACAAGTGATCAGCCATGTGATCCGAAAGATGGTGAGGATCAAAATAGTACTTGTGAAGAAATCATCAACATTAATTCATGTGTAAAAATATCATCCTCTCCAGGTTGCAATGAGACTGTTGGGAGCTCACCTGTAGTTGGTTTTCCTTGTGAGCCTGCCCTGTTGGATCCAGAGTATGAAATGAAGAATGGCATGCTGCAAATAGAAGATGATGCCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTACCAACTCTACCTTTAGAAAACCATTTTCTCCAGAATCAGGTCTGCCCTCTGTTGCTTTAATTACCAACTGCTCTGCAAAGGATGTTCCTGATCAACAGTCTAAGGGTGATGATGTTTCCATTGATAATAATAATGCTGTGAACAATCAAGGGCAGATGGATAATGATGGAACAGAAGCTGTTGAAGTTGATTGTATCACTGAAGGCATACCGTTACCTTCTCAAAGGAATAGTCGAAGAACTAAATTTGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAAATGCAAGAACAAAACCAAGGTTACACATCCAAATGGGGGTATGAAGCTAAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATTGATTGGAAATATTGAACAGTTTTTTGAGCAAGATAATGAGCTTGGAGATGGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCCTCAAAGTGGGAAAGCGGTTAAGAATGGTGCAAGTACTACCTCATTGGGTTCAGTACAGAAGCATTCTGTTTCAACTACTCGTGTTCGTCTGAAGATCAAATTTGGGAAAGAAGTTGATTTAAGTTGCTCAAATGTCTTGATTCCAGAGTCTGTTGATGGCTTGGCTTCTGCTTCCTATTTGGGGTCTGGTTCAGGTTCTCAGAAAGTAGCTGGCAATGCTGATGATAAAATTTCTGAAGTGGTGGCTTTGGGCCATTCAGAATCTTTCAATAATGACCTGGACAAGGATGGTTTTGTTCTAAATGAACAAGTTGCAAATAACCCCTTAGAAACCACTGAAATAACAGAGAAGTCATATGGGGATGCAGAGGAACCTTGTCTTGCAGTTCCTCCAGAGAAGGTGGTTGAAGCATTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACCTCACCTGATTCTGAAGTTATCAATTCAATTCCCGAAGTCCAGGCTGGAGAAAAACATCAAGAAGATGCACATCATGCTGTTTTAGGTTCTTCTAAAGAATTAAATTCTAAATTGGATGTTACCATCAGTAAGAGAGGGAAGAACAAAGAGAAAGTTATTTGTTCAAGTAATTGTATCACTGAAGATGGATCACAAGGTCCACATAAGAATAGTAGAGCTAAGCATTCAAAGAATCACAGACGTAAGAAAAATTGCAGGGATGTGGTCAGCTCTTTGGAATTGCCCACTGATATAAGCAAATCTTTGAGCAGTAAAGAATTGTCCCCAGAATCATTGCCTCTTTCTGTAGAGACTGAACTTGGAGGCTCCACTGAGGCTTTGAAAGTTAAAAATCATACGGACGTTAAGACAAGTGACAAACCATCTGTTGACCATGGATTTTCAGATTCCCTGGTTGCTGAGAATATGCTGTCATCTGCAAGACCTTTGGAGCGTAAACTACCTAAAAGTCTTAGAGCTAGTAAAGTTAGCAAGACCAAATCTAAAGCTTCTGACTCAACTGGCAGGAAAAAGACTACTGCTGGTATACGCAAGGAGAAACAGATAAAGGCAATTAATAAGAGCAAAGTCAAGGGAAAAGGTGTTTCTCTTAAAGTTACATGTGAAGTGGAAGATTGCCTGCATCCAGGCTTTTTTTTTGTCTCAGAAGAAAATGCTGGAAATCATAAGCTGGATGCTGTTGGAAAAATTATTGCTGATGACAACAGAGTATCGGTCAATTTATCTAATTTGGACATGCTGTCTGGTGTTGGTTATGGGGAGCAACTTCTATCACCCCGTAATGCATGGGTTCGTTGTGATGATTGTCACAAGTGGCGGCGAATTCCAGCTGTGCTTGCAGACCGAATTGATGAAACTAACTGCACCTGGACATGTAAGGACAGCAGTGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCGGAGTTGGGATTATCAGATGCCTCGGGTGAAGAAGATGCATATGAAGGTTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCGTTAGTTTCCCAGGAGTCAACTTTTACCCATATTTTGACCAATGAATTTCTGCATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGCCATCTCAAGAAGGAAAGTTGGGCTGTGGGGATGAATGTCTAAATCGGATTCTTAATATTGAATGTGTGCAAGGAACCTGCCCATGCGGGGACCGTTGTTCCAACCAGCAGTTCCAAAAACACAAGTATGCTAGCCTGAAGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCAATTGAGAATGTAGCTCAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTACTTGATATGCAAGCATACGAGGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATCGGCATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGAAGGATGAAGAATTGACCTTCGATTACAACTATGTGAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTAACTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAACTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTCATGCTCACCAAAGATGGTGAAATTGAAGATTCTGTACCTACACCCGAGTATTTTAATAATGTTGATACACAATCTGCTAAACATATGTTGAAAGACAGGGATATATTGGACAATTCTACAACTGCTATAGATTCGGATGGTTCTCTAGAGAAAGAGCGTTCTATGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCTCAGCAGAAATGGAGGATTCAAAGGGTAAATTACAATCTTCTGTTCAAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCCTGCTGTACACCAAGGATATGAAAAGGAATCAGAATTTGCAGACAAAACTTCTTCCATTCAAAGATTAGACACTACTTCTCCCCTTACAACTGTCAGCAAAATGTTACCGAATTCTGCTGGTAGTAACAGGGAGTCAAAGTCTGAAATAATTGGAGGCAGGAAGACTCCTAAGTTAAAAGGTTCTGTTAAAAAGGGAAAGGTTCATGCTAATCCTCCAAATGGCCTTAAAACTGAGGTGACAGCCAATCGATTACAGGTGCCATCAATAAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGTGGAATAAGCAAAAGAAAAGATGCCACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCAGGAGATAGAATTAATGGTGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCTCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTGCAGATGTTACATAACATTATGAAGCAGTACAGGCATGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTGGAGTTCCTAGAAGCAGGCAAGATTTTGACATATGAACATATTAATGGTGGTCCTCCTTGTCGTGGAATGGAGAGCTTTAGAGAGTCAATGCTTTCTCTGACAGAGCATGAAGACAAACAGGTCCATCAAATTGCTCGAAACTTCCGAGACAGATGGTTTCCCAGACATGCCAGAAAACATGGCTATATGGACAGGGATGATAACAGAGTGGAATCTCACAGAAGTTTCAAGTGTAACAGATTTTCAGCATCACAGAGTTATAGGCATGAACAGGATTTAAAGACTACAGAAGCAAGTGATTGTAGTCAGCAGTCGATGCTTGTGACAACTCCAGTAGATGCTGAAGCCCGGGAAGGCTTTCCTGTGCAGTCTCTAGATGGGGTTGAAACCAAAACAGCTGAAAAGCGTAAGCGCAAAAGCCGATGGGATCAACCAGCCGAAACAAACTCGCATTCTGATGTCGTTATGAGCTCTATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAGTAGGTTCATTAAATGCTTCCCTAAACTCTGGCAATCTTGCCTTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATATAATTATTGGTCATCCAAAAGAGAAATTTAACTCTTGCTTGGCTGTCTCATTTGGAATGCCATGGTCTGTTGCCCAGCAATATGGAACTCCTCATGCTGAATTTCCAGAGTGTTGGGTCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCGTATCCACGGGACAACAAAGATTGTCAACCTTCTAATACTAATGCTATGATAATTGATCAGCCTGCTGAAGTTGAGCAGGGGGATACCAGCGGTATGGTTAATTGTCGCTCTGATGATATGATTCCCAGCACAACTGGTGTTAACCCTGAAGACTCTAACCTTCTGTTTGAGGACAATAAACACATAAGTAAACGATTGAAGGGTGACTCAAATGATTTGGGAACGAGGTACTTTAGACAGCAGAAAATACACCGACCATGGTTCAAGAGGAATGCATGGAAATGTGATGAGAACAACTCTAGTGGTGATATGTGCAGTATAGATGTAGGAGATGTACCAAAAGAGTCAAAAGTTACTTGTGACGCGGAGGATGCAATCTGTAGAGAGGAGTAA 6141 0.42 MVEMGSCGRSAAIDNPSEKFIIEQQQHLCLEVQEQEVVSVVQESCLEEEACNVVDSNVELSTVIDGCLGEDRVCSKRCVDVTEGSREGLGLGLVSECENADLLPLEKSAEDDCQNYLGVSCGSIEVPCVNSGSEGRFLDEGNFDLPSGSLTADDSQMYCAQLDEQKDDESWSLITDDSQRHCAQQDEQKDDKSDVLPAAGDDLAVVEGKNDVTGVLADAFSHVHDFRDCEVSLESESMADLLVDCNWQSEQEEIMRNTDPLLNVVEKCDALIVEETDACRQISPTPAMEVPSGAPSGALCTDTEVESTSDQPCDQKDGEETDVCRQISPTLAMEVPSGAFWTDTEVESTSDQPCDPKDGEDQNSTCEEIININSCVKISSSPGCNETVGSSPVVGFPCEPALLDPEYEMKNGMLQIEDDACKLKDCSSEETTNSTFRKPFSPESGLPSVALITNCSAKDVPDQQSKGDDVSIDNNNAVNNQGQMDNDGTEAVEVDCITEGIPLPSQRNSRRTKFGRKTQTKKASRKCKNKTKVTHPNGGMKLNLEAARKKRSCFSKPARSSIWGLIGNIEQFFEQDNELGDGEAVCQELGKARSKPQSGKAVKNGASTTSLGSVQKHSVSTTRVRLKIKFGKEVDLSCSNVLIPESVDGLASASYLGSGSGSQKVAGNADDKISEVVALGHSESFNNDLDKDGFVLNEQVANNPLETTEITEKSYGDAEEPCLAVPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEVQAGEKHQEDAHHAVLGSSKELNSKLDVTISKRGKNKEKVICSSNCITEDGSQGPHKNSRAKHSKNHRRKKNCRDVVSSLELPTDISKSLSSKELSPESLPLSVETELGGSTEALKVKNHTDVKTSDKPSVDHGFSDSLVAENMLSSARPLERKLPKSLRASKVSKTKSKASDSTGRKKTTAGIRKEKQIKAINKSKVKGKGVSLKVTCEVEDCLHPGFFFVSEENAGNHKLDAVGKIIADDNRVSVNLSNLDMLSGVGYGEQLLSPRNAWVRCDDCHKWRRIPAVLADRIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPLVSQESTFTHILTNEFLHRSHKTQTIDEIMVCHCKPSQEGKLGCGDECLNRILNIECVQGTCPCGDRCSNQQFQKHKYASLKWFKCGKKGYGLKAIENVAQGQFLIEYVGEVLDMQAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKDEELTFDYNYVRVFGAAAKKCYCGSPNCRGYIGGGDPLNAELIVQSDSEEEFPEPVMLTKDGEIEDSVPTPEYFNNVDTQSAKHMLKDRDILDNSTTAIDSDGSLEKERSMNPASAVSLLHSSAEMEDSKGKLQSSVQVEEISQQMEDVTSKPMPAVHQGYEKESEFADKTSSIQRLDTTSPLTTVSKMLPNSAGSNRESKSEIIGGRKTPKLKGSVKKGKVHANPPNGLKTEVTANRLQVPSIKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRINGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRHDFKKIPILRKLLKVLEFLEAGKILTYEHINGGPPCRGMESFRESMLSLTEHEDKQVHQIARNFRDRWFPRHARKHGYMDRDDNRVESHRSFKCNRFSASQSYRHEQDLKTTEASDCSQQSMLVTTPVDAEAREGFPVQSLDGVETKTAEKRKRKSRWDQPAETNSHSDVVMSSIGESQNIHEDVPPGFSCPVGSLNASLNSGNLALQNASRSGCPSDIIIGHPKEKFNSCLAVSFGMPWSVAQQYGTPHAEFPECWVTAPGMPFNPFPPLPPYPRDNKDCQPSNTNAMIIDQPAEVEQGDTSGMVNCRSDDMIPSTTGVNPEDSNLLFEDNKHISKRLKGDSNDLGTRYFRQQKIHRPWFKRNAWKCDENNSSGDMCSIDVGDVPKESKVTCDAEDAICREE* 2047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0999 2046 Gene3D SET domain 1086 1340 IPR046341 -
Gso6g0999 2046 PANTHER SET DOMAIN PROTEINS 495 1983 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 906 943 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 817 831 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 502 538 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 876 890 - -
Gso6g0999 2046 ProSiteProfiles AWS domain profile. 1138 1188 IPR006560 GO:0005634|GO:0018024
Gso6g0999 2046 MobiDBLite consensus disorder prediction 806 836 - -
Gso6g0999 2046 CDD SET_SETD2 1189 1331 IPR044437 GO:0010452|GO:0046975
Gso6g0999 2046 MobiDBLite consensus disorder prediction 344 363 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 510 532 - -
Gso6g0999 2046 ProSiteProfiles Zinc finger CW-type profile. 1024 1078 IPR011124 GO:0008270
Gso6g0999 2046 MobiDBLite consensus disorder prediction 1783 1813 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 870 894 - -
Gso6g0999 2046 ProSiteProfiles Post-SET domain profile. 1315 1331 IPR003616 -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 595 614 - -
Gso6g0999 2046 SMART set_7 1190 1313 IPR001214 GO:0005515
Gso6g0999 2046 MobiDBLite consensus disorder prediction 1506 1528 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 600 614 - -
Gso6g0999 2046 Gene3D - 1021 1083 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 1788 1805 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 1393 1412 - -
Gso6g0999 2046 MobiDBLite consensus disorder prediction 925 943 - -
Gso6g0999 2046 Pfam SET domain 1201 1307 IPR001214 GO:0005515
Gso6g0999 2046 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 495 1983 - -
Gso6g0999 2046 ProSiteProfiles SET domain profile. 1190 1307 IPR001214 GO:0005515
Gso6g0999 2046 SMART shorttest3 1138 1189 IPR006560 GO:0005634|GO:0018024
Gso6g0999 2046 Pfam CW-type Zinc Finger 1030 1076 IPR011124 GO:0008270
Gso6g0999 2046 Pfam AWS domain 1153 1187 IPR006560 GO:0005634|GO:0018024
Gso6g0999 2046 SUPERFAMILY SET domain 1118 1328 IPR046341 -
Gso6g0999 2046 SMART PostSET_3 1315 1331 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0999 Gso-Chr6 9642166 9656792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0999 1173 1330 C2H2 Transcription Factor Family AT2G23740 33.702 5.09e-21 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso6g0999 SET 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0999 - - gmx:100795379 4006.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2051 4 50934390 50948965 Gso6g0999 6 9642166 9656792 GST