Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0986 ATGTCGACCCAGAATCGTCGTTCGTCGTTTTCGTCCTCAACGACGTCGTCCTTGGCCAAACGCCATGTATCCGCCTCAACGACGTCGTCGTCTTTGGCCGCTCCTGCAAACATGGCCAAGAAGCGTCCTCCTCTCTCCAACCTCACCAACACCGTTGCTCACCGCAACTCTTCCTCTTTGGTTCCATGCGCAGCTAAATTTGCCAAGACCAAGAAAGAGGTTGTTCCGGCGTGTTCAGGGAACAAAAGACCAACATTGGCGAATGTTAAACCCACTGGCGCAGCTATTTTTCCGAAGGCTAATTCTTTCCCTGTAAGGGATGAAGCTCCTCCTCCGGTTGCCACCGTTACTGTTCCGGCTCCGGTGGTGGATGTTTCACCTAGTAAATCAGATGCAATGTCGGTTTCTATGGATGAGTCAATGTCTTCTTGTGACTCCTTCAAGAGCCCTGACATTGAATATGTGGACAACATCGATGTTGCAGCCGTTGATTCAATTGAGAGGAAAACATTCAGCAATCTCAACATCTCTGATTCTACAGAAGGGAACATTTGTAGTAGAGACATACTTGTTGAGTTGGAGAAGGGAGAAAATTTTGTCAATGTTGATAATAATTACGCGGATCCTCAGCTCTGTGCAACCTTTGCTTGTGATATCTACAAGCACCTTCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGAGATAAACCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTTTCAGGGAATGTGATGAACAGACAAAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATACGAGGAAATTTGTGCGCCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAGATGGAATCTGCTGTCTTGAATTTTCTCAAGTTTGAAATGACAGCCCCAACAGTAAAATGTTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAGTCGATGAGGTCCCTTCCCTACAACTAGAGTGCTTGACAAACTATATTGCCGAATTGTCTCTCATGGAGTACAGTATGCTTGGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTGGCCAAATTCATACTTTTCCCTTCAAAGAAACCATGGACTTCCACATTACAGCATTACACGTTGTACAAGCCTTCTGATCTGTGTGTTTGCGTGAGGGATCTTCACCGTCTTTGTTGTAACAGCCCCAATTCTAATTTGCCTGCAATTAGGGAGAAATACAGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATTTTTCCAGAATTGA 1443 0.4456 MSTQNRRSSFSSSTTSSLAKRHVSASTTSSSLAAPANMAKKRPPLSNLTNTVAHRNSSSLVPCAAKFAKTKKEVVPACSGNKRPTLANVKPTGAAIFPKANSFPVRDEAPPPVATVTVPAPVVDVSPSKSDAMSVSMDESMSSCDSFKSPDIEYVDNIDVAAVDSIERKTFSNLNISDSTEGNICSRDILVELEKGENFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMERIQKEINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLTNYIAELSLMEYSMLGYAPSLIAASAIFLAKFILFPSKKPWTSTLQHYTLYKPSDLCVCVRDLHRLCCNSPNSNLPAIREKYSQHKYKYVAKKYCPPSIPPEFFQN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0986 480 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g0986 480 CDD CYCLIN 248 337 IPR013763 -
Gso6g0986 480 SUPERFAMILY Cyclin-like 207 344 IPR036915 -
Gso6g0986 480 Pfam Cyclin, N-terminal domain 218 344 IPR006671 -
Gso6g0986 480 Gene3D - 232 345 - -
Gso6g0986 480 PANTHER CYCLINS 30 479 IPR039361 -
Gso6g0986 480 SMART Cyclin_C_2 347 470 IPR004367 -
Gso6g0986 480 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Gso6g0986 480 MobiDBLite consensus disorder prediction 1 51 - -
Gso6g0986 480 CDD CYCLIN 345 438 IPR013763 -
Gso6g0986 480 PANTHER CYCLIN-A1-1 30 479 - -
Gso6g0986 480 Pfam Cyclin, C-terminal domain 347 466 IPR004367 -
Gso6g0986 480 SMART cyclin_7 351 439 IPR013763 -
Gso6g0986 480 SMART cyclin_7 254 338 IPR013763 -
Gso6g0986 480 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Gso6g0986 480 PIRSF Cyclin_A_B_D_E 1 476 IPR039361 -
Gso6g0986 480 Gene3D - 218 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0986 Gso-Chr6 9511066 9514206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0986 4 480 Core Cell Cycle Gene Families AT1G44110 62.733 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0986 K06627 - gmx:100789565 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2060 4 51043780 51046905 Gso6g0986 6 9511066 9514206 GST
Gso13g0159 13 10185625 10190399 Gso6g0986 6 9511066 9514206 PCT
Gso6g0986 6 9511066 9514206 Gso13g0159 13 10185625 10190399 PCT