Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0983 ATGGCTAGCCTGACACAACATCAACCAAAGGGGGTTAATGGAGGTAGCAGCCGCATAGCAGCCGTCAATGTCACACCTTCTAATAACCTTTCTACACCATCTCATCATGATGCCTCCTCAAATCATCAGAAACCTGGGTGGAAAAAGTTCCTGTCATATGTAGGTCCTGGCTTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATCTTCAAGCTGGAGCTGACCACAAATATGAGCTGCTGTGGGTAATACTTATTGGACTGGTGTTTGCGCTTATAATTCAATCATTGGCTGCGAATCTCGGCGTAACCACTGGCAAACACCTTTCAGAATTATGTAAAGCTGAATACCCATTATTGGTCAAGTACTGCTTATGGTTATTAGCTGAGCTGGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGCACGGCCTTTGCTTTGAACATACTCTTCCACATCCCTGTATGGGCAGGAGTTCTAATAACTGGCTGCAGCACCCTCTTATTTCTTGGTCTGCAGAGATTTGGGGTAAGGAAGTTAGAGCTGTTGATATCAATCCTAGTTTTTGTAATGGCTGGATGTTTCTTTGGGGAAATGAGCTATGTAAAACCTCCTGCATCTGGTGTATTGAAAGGAATGTTTGTGCCTAAACTCAGTGGTCAAGGAGCCACAGGCGATGCTATTGCCCTTTTGGGTGCACTTGTCATGCCGCACAATCTTTTCCTCCATTCTGCTCTGGTGCTGTCTAGAAAAGTACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATACTTTCTCATGGAAAGTGGATTCGCACTGTTTGTGGCATTTCTGATCAATGTTGCAATGATTTCTGTGGCTGGAACTGTTTGCTCTGCCGACAATCTTTCTGCAGAAAATGCTGATCAATGCAGCGATCTTACCCTTAACTCTGCTTCCTTCCTTCTCAAGAATGTTTTGGGACGGTCGAGCTCAACCATTTATGCCATAGCACTGCTCGCCTCAGGACAAAGTTCGGCTATCACTGGAACCTATGCAGGGCAATACATCATGCAGGGTTTCTTGGACATGAGGATGAAAAGATGGATTAGAAATTTTGTGACTAGGTGCATTGCCATAGCACCTAGTCTTATTGTTTCCATCATTGGTGGTTCTCAAGGGGCTGGTCGGCTTATCATCATCGCATCGATGATACTTTCATTCGAGCTCCCATTCGCATTAATTCCACTCCTTAAGTTCAGCAGCAGCAGTACCAAGATGGGACCTCACAAGAATTCTATAATTATCATTGTCATCTCTTGGATCCTAGGCTTGGGGATCATTGGTATCAACGTGTACTACCTATCCACCGCCTTCGTGGGTTGGCTAATTCATAGCAGTCTACCAAAGGTGGCAAATGTGTTCATAGGGATCATAGTGTTTCCTCTAATGGCACTATATGTTGCTGCAGTAATCTACCTAACCTTCAGAAAAGACACTGTTAAGACATATATTGAGACAAAGAATGAACCAGCAATGCAAACCCACATGGAAAAGGGGTTTATGGCTAATGGTCAATTAGAGTTGAGTCAAGTTCCCTACAGAGAAGATTTGGCTGATATCCCACTACCACAATAG 1635 0.444 MASLTQHQPKGVNGGSSRIAAVNVTPSNNLSTPSHHDASSNHQKPGWKKFLSYVGPGFLVSLAYLDPGNMETDLQAGADHKYELLWVILIGLVFALIIQSLAANLGVTTGKHLSELCKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLITGCSTLLFLGLQRFGVRKLELLISILVFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLMESGFALFVAFLINVAMISVAGTVCSADNLSAENADQCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDMRMKRWIRNFVTRCIAIAPSLIVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTAFVGWLIHSSLPKVANVFIGIIVFPLMALYVAAVIYLTFRKDTVKTYIETKNEPAMQTHMEKGFMANGQLELSQVPYREDLADIPLPQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0983 544 Hamap Divalent metal cation transporter MntH [mntH]. 35 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PANTHER METAL TRANSPORTER NRAMP5 40 544 - -
Gso6g0983 544 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso6g0983 544 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 544 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0983 Gso-Chr6 9484537 9489195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0983 31 544 Inorganic Solute Cotransporters AT1G15960 61.197 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0983 K21398 - gmx:100787785 1043.88