Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0975 ATGGAGTTTCTGGATACCAGAAAACTACAGTTACAACAACAACAACTGCAACAACAGCCACAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGGCTAATTGATGAGCTTGATGATACTTCTTCAACCACTTTAGAATCAGAATCTTCTCATCCTCCACCTCAACCATTACAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGAAGGGGCACAAGAGTTTCTATTGAAGCCTCTTCAGTTATCGGATTTGGATAAGCTTCAGCCGTACTTTCTGAAATCGCTTGGCAATTCTTGTGAGAAAGAATCTGCTAACAGTTCCATAGATTCAAACAATGACAATGTCATCAACAACAACAGCAATAACAATAACAATAACAACAATAATAATATTAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCATCAGGAGGAGAGATCAAGACCCAAAATGAAAGAGTTAGCGGTGGTGTAA 699 0.4077 MEFLDTRKLQLQQQQLQQQPQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSHPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAQEFLLKPLQLSDLDKLQPYFLKSLGNSCEKESANSSIDSNNDNVINNNSNNNNNNNNNNISKRKAMSPEPHQEERSRPKMKELAVV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0975 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 9 231 - -
Gso6g0975 232 MobiDBLite consensus disorder prediction 212 232 - -
Gso6g0975 232 SUPERFAMILY CheY-like 22 161 IPR011006 -
Gso6g0975 232 MobiDBLite consensus disorder prediction 176 232 - -
Gso6g0975 232 Gene3D - 24 226 - -
Gso6g0975 232 Pfam Response regulator receiver domain 94 160 IPR001789 GO:0000160
Gso6g0975 232 SMART REC_2 23 163 IPR001789 GO:0000160
Gso6g0975 232 ProSiteProfiles Response regulatory domain profile. 24 167 IPR001789 GO:0000160
Gso6g0975 232 MobiDBLite consensus disorder prediction 176 211 - -
Gso6g0975 232 CDD REC_typeA_ARR 25 162 - -
Gso6g0975 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 231 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0975 Gso-Chr6 9397942 9401687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0975 22 169 Response Regulator Gene Family AT3G57040 59.732 3.93e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso6g0975 Response_reg 1.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0975 K14492 - gmx:100786187 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2070 4 51140891 51144559 Gso6g0975 6 9397942 9401687 GST