Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0972 ATGGCAGAGCGTGTGTTACTCCTCACTCCATCTCAGTCTCATCACTCTCCAACCACAATGGCTGTCTTGGGCGGCGCCGCCTCCGCTCGCATCATTCCCTCCGTCTCACTCTCCACCTCTTCTCGCTCCTTCTTCTCCTTATCATCCTCTTCCAAACTCAAATGCTTGCGCTCCTCTCCTCGCATTTCGCACCTCTTTCTCAATCAGCAAAGAGCGGAGGTTCGCGTTTCGAGTGGAGGATACGGAACGGTATCGGCGCCGAAGTCCGTTGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGACATCAAGGAGCTTCTCAACTCCAAGTTCTGCCATCCTATTCTCATTCGTTTGGGATGGCATGATGCTGGTACATATAATAAGAATATTGAGGAGTGGCCACTGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAGCTGAAACATGGAGCCAATGCTGGACTTTTAAATGCATTGAAACTTCTTCAGCCGATCAAAGACAAATATTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTAGTGCTACGGCTGTGGAGGAAGCTGGAGGCCCCAAAATCCCTATGAAATATGGAAGAGTGGATGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGGCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGTATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGCAGTGGTTGGGGAAAGCCTGAAACTAAATATACGAAAGATGGGCCAGGAGCACCCGGAGGACAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCCTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCCTTTAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCTAAACTTAGCAACCTAGGAGCCAAATTTGATCCTCTAGAGGGCATTGTGATAGATGATTCTCCAAATGCAGGGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCATTGGAAAGAGTGAGCTGTCTGACTCTATGAAGCAGAAGATACGGGCTGAATATGAAGCAATTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATGATTATTATTGCTGTTTTGGCATTTTTGACATCACTGCTTGGAAACTAG 1299 0.4611 MAERVLLLTPSQSHHSPTTMAVLGGAASARIIPSVSLSTSSRSFFSLSSSSKLKCLRSSPRISHLFLNQQRAEVRVSSGGYGTVSAPKSVASDPDQLKSAREDIKELLNSKFCHPILIRLGWHDAGTYNKNIEEWPLRGGANGSLRFEVELKHGANAGLLNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPLEGIVIDDSPNAGGEKFVAAKYSIGKSELSDSMKQKIRAEYEAIGGSPDKPLQSNYFLNIMIIIAVLAFLTSLLGN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0972 432 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 19 432 IPR044831 GO:0004601|GO:0034599
Gso6g0972 432 CDD ascorbate_peroxidase 85 355 - -
Gso6g0972 432 Pfam Peroxidase 101 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Plant ascorbate peroxidase signature 93 113 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Plant ascorbate peroxidase signature 114 129 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Plant ascorbate peroxidase signature 175 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Plant ascorbate peroxidase signature 194 206 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Plant ascorbate peroxidase signature 313 337 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Haem peroxidase superfamily signature 176 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Haem peroxidase superfamily signature 194 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PRINTS Haem peroxidase superfamily signature 284 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 19 432 - -
Gso6g0972 432 ProSitePatterns Peroxidases proximal heme-ligand signature. 244 254 IPR019793 -
Gso6g0972 432 ProSiteProfiles Plant heme peroxidase family profile. 176 371 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 Gene3D Peroxidase, domain 2 222 345 - -
Gso6g0972 432 MobiDBLite consensus disorder prediction 251 279 - -
Gso6g0972 432 SUPERFAMILY Heme-dependent peroxidases 95 354 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso6g0972 432 MobiDBLite consensus disorder prediction 209 228 - -
Gso6g0972 432 Gene3D - 100 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0972 Gso-Chr6 9350970 9357519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0972 117 359 Peroxidase AT2G18140 28.417 4.40e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0972 K00434 - gmx:100784258 732.25