Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0971 ATGTCGGTTGAGGAGATGCAGTCACAGAAGAGGAATGTGTTTGACGCAGAAACGGCGTCGTCCTTGGTGAAGGAGCTGAGGGACAACTTCGGTTCGGGAAGGACTCGGAGTTATGAATGGAGAGTGTCACAACTGAAGGCTCTGTTGAAGGCGGTGGTTGATAACGAGGAACAGATCGTCGACGCTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCATCGTCTACGAGGTTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAATGGATGAAGCCAGAAAAGGTCAAAACATCAATCAGAACTTTTCCTTCGTCAGCTGAAATAGTACCTGAACCACTGGGTGTTGTGTTGGTCATCTCTGCATGGAACTATCCAATTTTGTTGTCTCTTGATCCAGTCGTTGGAGCTATAGCTGCTGGGAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCTGCCTCATCATCATTATTATTAAAATTGATAGAGAAGTATTGTGATAACTCATTTATAAGAGTTGTGGAGGGGGCAGTTGATGAAACAACCGCACTATTGCAGCAAAAGTGGGACAAGATTTTCTACACAGGCAATGGAAAAGTGGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGATTCCAATGTCGATTTGCAGATAGCAGCTAGGCGAATAATTTCTGGCAAGTGGGGATTGAATAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGATTGTGCTCCCGAGTTGGTGGATGCCCTAAAGACTGAATTGGAGAAATGTTATGGAAAGAACCCGTTGGAATCAGAAGATTTGTCTCGGATTGTGACTTCCAACCACTTTGCTCGATTGTCAAAGCTATTGGATGATGATAAGGTTGCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAAGAAATTAAGGATTGCTCCCACTCTTTTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGATGAGATATTTGGTCCATTACTTCCTATTATCACGGTGAATAAAGTGGAAGAAAGTATTGATTTGATCAACTCAGGAACAAAGCCCCTGGCTGCATATATATTTACAACCAACAAGAAGTTAAAGGAGCAGTTCGTAATGAATGTTCCTGCAGGGGGTTTGCTTGTCAATGACACTGTCTTACATCTTGTCGTTGATACTTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAGTTCTCTTTTGATGCTTTTACACACAAAAAGGCAGTTCTTTATCGCAGTTTTGCTGGTGATTCATCATTAAGGTACCCACCATACACGGATACAAAGCTGAGATTGATGAAGGCTCTCATCGGTGGTCGTTTCCTCGGAATAATTCGTGCTCTTTTCGGATGGTCCTAA 1476 0.4309 MSVEEMQSQKRNVFDAETASSLVKELRDNFGSGRTRSYEWRVSQLKALLKAVVDNEEQIVDALRSDLAKPPLETIVYEVGMFKNSCEVILKELKQWMKPEKVKTSIRTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLLKLIEKYCDNSFIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNVDLQIAARRIISGKWGLNNGQACISPDYVITTKDCAPELVDALKTELEKCYGKNPLESEDLSRIVTSNHFARLSKLLDDDKVAGKIVYGGEKDEKKLRIAPTLLLDVPRDSLIMGDEIFGPLLPIITVNKVEESIDLINSGTKPLAAYIFTTNKKLKEQFVMNVPAGGLLVNDTVLHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSLRYPPYTDTKLRLMKALIGGRFLGIIRALFGWS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0971 491 PIRSF ALDH 3 484 IPR012394 GO:0006081
Gso6g0971 491 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 224 231 IPR029510 GO:0016491
Gso6g0971 491 SUPERFAMILY ALDH-like 22 461 IPR016161 GO:0016491
Gso6g0971 491 PANTHER ALDEHYDE DEHYDROGENASE 4 491 IPR012394 GO:0006081
Gso6g0971 491 Pfam Aldehyde dehydrogenase family 15 448 IPR015590 GO:0016491
Gso6g0971 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 446 IPR016162 GO:0016491
Gso6g0971 491 PANTHER ALDEHYDE DEHYDROGENASE 4 491 - -
Gso6g0971 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 228 428 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0971 Gso-Chr6 9343186 9347108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0971 79 489 Aldehyde Dehydrogenase Gene Family AT1G44170 71.046 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0971 K00128 - gmx:100783726 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2074 4 51188659 51194508 Gso6g0971 6 9343186 9347108 GST