Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0968 ATGGCATCAGAGCTTGAATTGCCCCCAGGCTTCAGATTCCATCCAACGGACGAGGAGCTGGTGTTGCACTATCTCTGCCGCAAATGCGCGTCGCAGCCAATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCCTGGGACTTACCCGGATTGGCTACTTACGGAGAGAAAGAGTGGTACTTCTTTTCACCACGGGACCGGAAATACCCAAACGGTTCGAGGCCGAACCGGGCGGCTGGCACCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCAGCCCAAACCGGTTGGGATTAAAAAAGCTTTGGTGTTTTACGCAGGGAAAGCTCCTAAAGGGGACAAAAGCAATTGGATCATGCACGAGTATCGTCTCGCAGACGTAGATCGCTCCGTTCGCAAAAAGAACACCCTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGCACGATCGAGAAACTGCAACCAAGCAGCGATGTTGCTCATAGCCGAAATATCGAATCCTCGGAGATCGAAGACAGGAAGCCGGAGATTCTGAAAAGCGGAGGAGGTTGTCTTCCGCCGCCTGTGCCGGTGCCTGCGCCGCCGCAAGCGACGGCGAAGACGGATTACATGTACTTCGACCCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCAGGTGGTATCGCCGGAATTCGCGAGCGAGGTGCAAAGCGAGCCCAAGTGGAACGAGTGGGAGAAAAGCCTCGAATTTCCATTTAATTACGTGGATGCCACTCTCAACAACAGCTTCATGGCCCAATTCCAGGGCAATAATCAGATGTTGTCGCCGCTGCAGGACATGTTCATGTACTGGCCCAACAAGTCCTTTTGA 900 0.5378 MASELELPPGFRFHPTDEELVLHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLATYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNTLRLDDWVLCRIYNKKGTIEKLQPSSDVAHSRNIESSEIEDRKPEILKSGGGCLPPPVPVPAPPQATAKTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKSLEFPFNYVDATLNNSFMAQFQGNNQMLSPLQDMFMYWPNKSF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0968 299 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Gso6g0968 299 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 277 - -
Gso6g0968 299 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Gso6g0968 299 PANTHER NAC TRANSCRIPTION FACTOR 56 2 277 - -
Gso6g0968 299 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Gso6g0968 299 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0968 Gso-Chr6 9316834 9319071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0968 1 293 NAC Transcription Factor Family AT1G01720 69.536 6.56e-148 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso6g0968 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0968 - - gmx:732553 618.616