Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0954 ATGGACGCCACCGTCACTCAGCTCAGTCCCTCCTGCAATGCAGCCGAGCCGCCGCGCCGCATTGTTCGCCGGCGGCTGGTCCAGACGACGCTCTTTCCTCACAAGCCACCAGAGCCCGTCGAAAAGAACGACAAAGAGGACGAACGCCATGAGGATTACTCCGACGCTGAGAATCACAAGAAGAGGAAGAAGCCCAAGGCTAAAACCACTCCTCGAAAAAAAGCTTCCAAGAATGCCACGCCAAAGAAAAATGCATCGGCTAATGGGACTAACAAGGGTTCAACTTCGCGGCAGGTGTTGGCTGATTACGATCCGGTTAGTGCAACGGAGCATGATTTGTTTTTAGAAGCGAAATTGGCTGCTGAGGAAGATTCGAGGATATTTGCAGGACGGCAGATACATCCATTTTTTTCACTGTGGAAGGCGGGGAAGAAAGTTCAGGACATGGCTGATTCAGGAAGTAATTTATCGACAACAAAGAGTGAGGAAGAAAGGACTACCTGTGGTCCTATTCATGTATTTGAAAATACTCAGGATGATACCCCATCCCTTGACTGGAGAAACTGGGCGTTTTTGGAGAATACTACCACTATGAATTATGGTCCAGAAATTTTAAATTCATCTGTTTTGGAGGGTTCTGTTGAATCCTTGAATTTTGATAAGCTTCATAGTTCCTTGGATCCATCAGGTGTTTCAATTTCTCAGAATGCCTTATCTTCAGATAGACTTTGTATACATCCAGAAAATCTAGAAGAAGTATCACCATCAGACTCAGCTTCACTAGCAGAGAAAACATGTCCTCCGACATGTGAAGATGCCAAACTGGACTTGGAGGTGGATGAATCCGTTACTACAACAGTGCAAGCTGGCATTTTTAGAAAGTCAGATACTGAACCACCAAGTAGATTTCTTCAAGAAAGTATGAGATCTTATTATCGTAGTTGTGTAGATAAGGCAGAGAACAGCTTATGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCAGTGAACTTCTTGCGTGATTGGCTACATCTTTGGCATGAAAGACGTTATAAAAGCAGGAAGGATATCTCTGACATGGATAAAAGTGACATGCGAGATGTTGATGATGATTATAAATGCTCTTATAGCGACTACGATTCAGAAGATATAAATGAGGAGGATTCCCTGCAGAATGTTCTTTTAATTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCAGTTTATGCTTGTGCTGAAGAGCAAAGGTTTGAGATTTTAGAGCTTAATGCATCAGATTGTAGAAATGGAACTGCTGTCAGGAATTATTTTGGAGATACTCTTGGTTCACTTGGGTTTAAAAGGGCATCAGAAATCACTTCAAGTTCACAGAAGAAAACTACAAAGTTGTCCCCGGCTTCGGCTTTGCAAAGTGGTAAAGCTGCTGATGAGGTGAAGGATGGGGTGAATGAACTGATAACCATATCTGATGATGAAGCTCATATCCCCAGTGGATCATCACAGAAGTTACTTGGCAAAAACAATGTAGTTGCATCATGTGATAAAGTGCAAACTTTAATTCTAATTGAGGATGTAGACATCCTTTCTCCTGAAGACCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACTGCAAAGGGGCCAATTATATTGACCAGTAATAGTGTGAATCCTGGCCTGCCAGGTAATTTTGACGTGCTCCATGTTTCATTCATGTTGCCATCGCCACAGGAGTTGCTTTGCCATTTGTACACCGTTTGTCTCACTGAAGGAGTCAACATCCATCCTCTTTTACTGGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAATCCATTATGCATCTTCAGTTCTGGTTTCAGAGTAAAAGATTTCAAAAAGATGTAATGACACAAACATGTTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATACTACCAAAGATAATGCCCTGGGATTTCCCCTCAGAGATATCCGAACTAATTGAGAATGAAATCGCCAAATTAACAAATATAATGGAAGAAAACTCTAGAGGGTTAGTTACAGAAGAGCTTCTTCCCATAAATGAGCAGCAAAATGATTTAAATGTGCAGTGTATGGAGGCTGATTATATAGAGGCCAAGAAGGTGGAGATGATTAAGAGAAATGGGTCTTTGACAGATTACAGTGAGCTTGAAATTCAATATAATGCTATTTCTGAGTTTTCCAATTCTTCTGGTTCCCCACTTACATCTTCTCGGCATAATGGTCGAAGGAAACTTGTAGTTATGTCCTCTGATTCTGAGGATGAGGATTCAAATAATGGGTATCCTGTAGACACACATGAAGAAGCTAATACAAGACAATCGATGAAAGAAAATAATGGATGTCCCTCTGAACTTCAATTAAATGGAAACTACCCTAGTACATCAGTTCGCAAGCTGGTTTGTTCCGAATTGGAGCATTCAGAGGAGGAACATTTTAAATATTCAGAAACAACTGATGATACATGCGTAAATGAAACATGTAAATCATTAGATGTATCCTGTGTGCCAGAATCAACTTTTGTTCCTGAGACTGAAATTGAAAATGGAACGGAGTCAATGTATGAAGCAGTGTCTTCTGGCCCTCTTTTTGGTCCTCAGGAAGTTTCTGTTTATAATGAGTTGAAACCATTCACTTTCAGTGTTCCTAGGCACTTAACAAAACTGTCACAAAATCCAGATTTGTTGGATACTGAAATTTCAGATCATTCTTGTAAAGGAGTTCAACAAGATGTTCTAGATGAACATATGGAAACAATTGTTAATGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGCCAACGTGTTTGCAATCTAATTCATTTGCTGAGACAGAAAATATACAAAAGTTGTGGGGAGATCTTCTTGAGTGTCGAATGGATTTAAGACAGCATGCTACCTCAGAACAGCTAGGTGCTTTTCAAGTTGTTAGACTTGCTAGTGGACTGAACAATCTAATTTCAGAAGCTGACTTATTTCATGAACGTGATATTATGGAACCTTCAGCGTTCCTTTCCGGTGAAACCACATCTATTCGGTATCATGAAAAAATAATGACGTCCACCATTGCTGAACATGGGTTTTGCTTTTACGCTAAGCTTATAGCAGATGAAGCATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCACCATTAAATTAACCGGACAGGATCTCGCGAGAAGCAAAGTTATGTATACTGGAAAGCAAGTAGAGTGGAACAGCCCAATAAATAATACGCAGAAGAGTGAAAACAAAACATCTCAGTTCGAGGCCATCCAATCCATTGTTCCTGCAAGAATATACTTGGCATTAAAAGGTGATGTATTCAATGAATATCTATCTTCATTACGCCAAATTTCCAGGGCAGAAGCTTCCCGCAGTTCACAAGGAGTTGAGAAGAAGAGAAGAGGAAGGGTACGTGGTTTTCACCATTACTTGAACAGATGTACCACGTTGTCTCCTGAAGATATATCGTTGGTGAGTGAGGGTAATCTGTACAGAAAGAATTCTACACAACATACAACATAG 3618 0.4069 MDATVTQLSPSCNAAEPPRRIVRRRLVQTTLFPHKPPEPVEKNDKEDERHEDYSDAENHKKRKKPKAKTTPRKKASKNATPKKNASANGTNKGSTSRQVLADYDPVSATEHDLFLEAKLAAEEDSRIFAGRQIHPFFSLWKAGKKVQDMADSGSNLSTTKSEEERTTCGPIHVFENTQDDTPSLDWRNWAFLENTTTMNYGPEILNSSVLEGSVESLNFDKLHSSLDPSGVSISQNALSSDRLCIHPENLEEVSPSDSASLAEKTCPPTCEDAKLDLEVDESVTTTVQAGIFRKSDTEPPSRFLQESMRSYYRSCVDKAENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVDDDYKCSYSDYDSEDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQRFEILELNASDCRNGTAVRNYFGDTLGSLGFKRASEITSSSQKKTTKLSPASALQSGKAADEVKDGVNELITISDDEAHIPSGSSQKLLGKNNVVASCDKVQTLILIEDVDILSPEDRGCIAAIQQIAETAKGPIILTSNSVNPGLPGNFDVLHVSFMLPSPQELLCHLYTVCLTEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKRFQKDVMTQTCYGSLPFDLELGHQILPKIMPWDFPSEISELIENEIAKLTNIMEENSRGLVTEELLPINEQQNDLNVQCMEADYIEAKKVEMIKRNGSLTDYSELEIQYNAISEFSNSSGSPLTSSRHNGRRKLVVMSSDSEDEDSNNGYPVDTHEEANTRQSMKENNGCPSELQLNGNYPSTSVRKLVCSELEHSEEEHFKYSETTDDTCVNETCKSLDVSCVPESTFVPETEIENGTESMYEAVSSGPLFGPQEVSVYNELKPFTFSVPRHLTKLSQNPDLLDTEISDHSCKGVQQDVLDEHMETIVNVMDECSRVDFKLKPTCLQSNSFAETENIQKLWGDLLECRMDLRQHATSEQLGAFQVVRLASGLNNLISEADLFHERDIMEPSAFLSGETTSIRYHEKIMTSTIAEHGFCFYAKLIADEASKLGCANCVDITSEMLASTIKLTGQDLARSKVMYTGKQVEWNSPINNTQKSENKTSQFEAIQSIVPARIYLALKGDVFNEYLSSLRQISRAEASRSSQGVEKKRRGRVRGFHHYLNRCTTLSPEDISLVSEGNLYRKNSTQHTT* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0954 1205 MobiDBLite consensus disorder prediction 37 60 - -
Gso6g0954 1205 MobiDBLite consensus disorder prediction 769 798 - -
Gso6g0954 1205 MobiDBLite consensus disorder prediction 61 79 - -
Gso6g0954 1205 Gene3D - 321 569 IPR027417 -
Gso6g0954 1205 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 76 1204 IPR004582 GO:0006281
Gso6g0954 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 635 IPR027417 -
Gso6g0954 1205 Gene3D - 582 645 - -
Gso6g0954 1205 MobiDBLite consensus disorder prediction 80 98 - -
Gso6g0954 1205 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 76 1204 - -
Gso6g0954 1205 MobiDBLite consensus disorder prediction 1 98 - -
Gso6g0954 1205 MobiDBLite consensus disorder prediction 784 798 - -
Gso6g0954 1205 CDD AAA 401 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0954 Gso-Chr6 9189538 9200099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0954 320 627 Core DNA Replication Machinery Family AT5G22010 25.078 3.57e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0954 - - gmx:100784968 2328.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2088 4 51310417 51320170 Gso6g0954 6 9189538 9200099 GST