Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0948 ATGCGTACGTGGTTGAGAAATGCAAAGCCGTATTTGCTGTTATTGGCGGTTCAATTTGGGTCTGCAGGAATGTTCATATTTGCCATGGATGCCATCAAGAAGGGTATGAGTCATTACGTGTTCACCGTCTACCGTAATGTCATCGCCTCTGTAACTCTCGCTCCCTTTGCATTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGATATTTTCAGAGATTATGGTGCTGGCTTTCTTCGAAATAATACTGGATCAATGCTTTGCCCTGTTGGGCATGAAATTCACGTCGGCATCTTTCCTATCTGCTGTGATGAACTCCGCACCCTCTGTTACTTTTTTGTTGGCTGTCATTCTAAAATTGGAGCACATGAAGATCAAAGAGGTAACATGTCAAGCCAAAGTGATTGGCACGGTAATCACTTTTGGAGGGACCTTGCTAATGGCAATATACAAAGGCCCAGTACTTAGTGTTATGAGGTCTTCAGCCAGCCACGCTGGCCAACCTGAGAATGTCACCAACCCCAGCGGTAACCACTGGATCATAGGGACATGTTTCCTCCTTATTGGTTGTGCAGGCTTTTCTGCGTTTTACATATTACAAGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCCACTTGGATTTGCTTTGTTGGTGCACTTCAAAGTTCTATTGTAGCAGTCTTCGTAGAACGCCACCATCTTCATGCCTGGGCCCTTGGTTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCTGGAGTTCAATATTACATACAAGGCGTGGTCATAAAACTTATGGGTCCAGTTATTGTGACAGCTTTTAATCCCCTGCGTATGATCATTATTACTACCTTGGCCTGCATAGTCCTATCTGAACAACTCTACCTCGGAAGTATTATTGGAGCAACAGTTGTGGTTCTTGGGCTCTATCTTGTTGTGTGGGGAAAATATAAGGAATGCCACGGAAGATCAATGCCACCGTCCTCTGCAAATGATAACCCTCCAGAAGACCAACGGCAGCTACCGGTCACAGCTACTAGGAATGATAATAAGACTTAA 1089 0.4481 MRTWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFTVYRNVIASVTLAPFAFVLERKVRPKMTVRIFSEIMVLAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFLLAVILKLEHMKIKEVTCQAKVIGTVITFGGTLLMAIYKGPVLSVMRSSASHAGQPENVTNPSGNHWIIGTCFLLIGCAGFSAFYILQVITLRKYPAEMSLATWICFVGALQSSIVAVFVERHHLHAWALGWDTRLFAPAYAGIVSSGVQYYIQGVVIKLMGPVIVTAFNPLRMIIITTLACIVLSEQLYLGSIIGATVVVLGLYLVVWGKYKECHGRSMPPSSANDNPPEDQRQLPVTATRNDNKT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0948 362 PANTHER WAT1-RELATED PROTEIN 7 354 - -
Gso6g0948 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Gso6g0948 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 327 - -
Gso6g0948 362 MobiDBLite consensus disorder prediction 334 362 - -
Gso6g0948 362 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Gso6g0948 362 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Gso6g0948 362 MobiDBLite consensus disorder prediction 336 362 - -
Gso6g0948 362 PANTHER WAT1-RELATED PROTEIN 7 354 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0948 Gso-Chr6 9127175 9131446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0948 2 360 Nodulin-like Gene Family AT2G37460 42.061 2.55e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0948 - - gmx:100776215 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2094 4 51373872 51374697 Gso6g0948 6 9127175 9131446 GST