Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0946 ATGGAAGAAATATGTTGTGCTAATAATTTTGGCAAGAATTACTTCACCAAGGCAAAGCCATATTTCTTGACGGTGGCACTGCAGTTTGGTTTCGCAGGAGGGTACATCTTCACCGTAGCCAGTTTCAACAGTGGAATGTGTCGTTTTGTGTTCATTGTCTATCGCAATGCCTTCGCTGCATTGGCCCTCGCTCCTTTTGCATTCATCTTTGAGAGGAAAATTAGGCCGAAGATGACACTTCCTGTCTTCTTACAGATAATGGCACTCGGATTTATGGAGCCAGTGATTGACCAAGGGTTCACTTTCTTGGGAATGCAATATACGTCGGCTTCCTTTGCCTCTGCTGTAGTAAATGCCGTGCCCTCTGTCACTTTTGTGCTAGCCCTAATTCTAAGGTTGGAGCGTGTGAATGTGAAGGAGGTACGTAGCCTAGCGAAGGTGATTGGAACTTTGGTAACCTTTGGAGGCGCTTTGTTGATGACACTATATAAAGGCCCTCAAATTAACCTTTTTTATTCTCCAAACACAACCCACCAACAAGATGGGGTTCACTCCCCTCAGGGTCTCAAACACTGGGTCTCAGGGACACTCTTTCTTCTCCTGGGTTGTGTCGCTTGGTCATCTTTCATCATTTTACAGTCGATAACATTGAAAAGGTATCCGGCAGAATTGTCACTCTCTTCATTGGTATGCTTATCGGGTGCTTTGCAAGCTGGCGTGGTGACACTTGTGGCTACTCATCAATCTGGGCTTGGGCCATGGGCCTTAGGTTGGGATTTCAGACTCTATGGTCCTCTCTACACGGGAGTAGTAACCTCTGGAATTACGTATTATGTGCAAGGGTTGGTATTGCAAAGCAAAGGACCGGTATTTTTCACAGCCTTTAATCCCCTTTGCATGATCATAACTTCTGCTTTAGGCTCCTTCATTTTTGCCGAGCAGCTTCACCTGGGCAGTATCATTGGAGCCATCATTATCGCACTGGGTCTGTACTCTGTGGTGTGGGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGACTATTCAGACCCCACGCCACCATCACCTACTACAAAGAAAACGGAGACACAGCACCTGCCAATTACCTCATCTGATATCTAA 1119 0.462 MEEICCANNFGKNYFTKAKPYFLTVALQFGFAGGYIFTVASFNSGMCRFVFIVYRNAFAALALAPFAFIFERKIRPKMTLPVFLQIMALGFMEPVIDQGFTFLGMQYTSASFASAVVNAVPSVTFVLALILRLERVNVKEVRSLAKVIGTLVTFGGALLMTLYKGPQINLFYSPNTTHQQDGVHSPQGLKHWVSGTLFLLLGCVAWSSFIILQSITLKRYPAELSLSSLVCLSGALQAGVVTLVATHQSGLGPWALGWDFRLYGPLYTGVVTSGITYYVQGLVLQSKGPVFFTAFNPLCMIITSALGSFIFAEQLHLGSIIGAIIIALGLYSVVWGKGKGKGKGKDYSDPTPPSPTTKKTETQHLPITSSDI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0946 372 MobiDBLite consensus disorder prediction 339 372 - -
Gso6g0946 372 Pfam EamA-like transporter family 194 334 IPR000620 GO:0016020|GO:0016021
Gso6g0946 372 Pfam EamA-like transporter family 22 161 IPR000620 GO:0016020|GO:0016021
Gso6g0946 372 PANTHER WAT1-RELATED PROTEIN 14 366 IPR030184 GO:0016021|GO:0022857
Gso6g0946 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Gso6g0946 372 MobiDBLite consensus disorder prediction 350 372 - -
Gso6g0946 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
Gso6g0946 372 PANTHER WAT1-RELATED PROTEIN 14 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0946 Gso-Chr6 9103924 9109225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0946 17 371 Nodulin-like Gene Family AT4G08300 47.339 5.52e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0946 - - gmx:100775669 706.057