Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0937 ATGGACATAGATGCTATCCACAACCTCGACTTCTCCGGATACAGCACCATCACCAACACAACCCCCTCTTCTGATGATGACTATGGTTGCAACTGGAACCACTGGTCCCCCGTCGTCAACTGGGACGCCTTCACCGGCGCCCACGACGACTTCCACCAAATCATCGACTCCATCATGTGCGACGGCGCCGCCCCCGAGGAGGACAACCTCAGCCCCGACGACCACGTCGCCAGCAACTCCCCCTCCGTCTCCATCACGGAGGAGGACGACGACGCCGGCGACGATTCCAAGGGCCTGAGACTCGTCCATCTCCTTATGGCCGCCGCGGAGGCCCTCAGCGGCGCCCCCAAGAGCCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGTCCCACGCGGCGCCGCACGGCTCCACCATGGAGAGGCTCGCCGCCTACTTCACCGACGCGCTCCAGGGCCTGCTAGAAGGCGCAGGGGGTGCTCACAATAACAACAACAAGCATCACCACCACTACATCACATCATGTGGGCCCCATCACCACCACCGCGACGATCATCATCATCAAAACGACACCCTCGCGGCGTTCCAACTGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGATCGCCGTGTCCACATCGTCGATTACGACATCATGGAAGGGGTCCAGTGGGCCTCCCTCATTCAGGCTCTTGCCTCCAACAAAACGGGCCCACCGGGCCCACACCTTCGTATAACCGCATTGTCCCGCACCGGCTCCGGACGCCGCTCCATCGCCACCGTCCAAGAAACCGGGCGCCGCTTAGCCGCCTTCGCCGCCTCCCTTGGCCAACCGTTCTCCTTCCACCATTGCAGGTTGGAGCCCGACGAAACGTTTAAACCTTCGTCGCTTAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGTATGCTAAACTTACCGCACCTTAGTTACCGCGCGCCCGAATCGGTTGCGTCGTTTTTGAGCGGAGCCAAAGCGTTGAAGCCGAGGCTGGTGACTTTAGTGGAGGAGGAAGTGGCCTCCATTGTTGGAGGGTTCGTGGCGCGGTTTATGGATTCGCTGCATCACTATTCAGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGCCGGGCCAGGGCACTTGTGGAGCGGGTTTTCTTGGGCCCGAGGATAGTGGGCTCGCTGGCCCGGATGGGGGAAGAGGAGGAAAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGGCGGGGTTCAGGGGAGTTCCGATGAGCTTCGCGAATCATTGCCAAGCGAAGCTGTTAATTGGTCTTTTCAACGACGGGTATAGGGTGGAGGAGTTGGGGAGTAATAAGTTGGTCTTGGATTGGAAATCTAGGCGCTTGCTCTCTGCCTCGCTTTGGACTTCTTCCTCCCACTCAGATTAA 1488 0.5974 MDIDAIHNLDFSGYSTITNTTPSSDDDYGCNWNHWSPVVNWDAFTGAHDDFHQIIDSIMCDGAAPEEDNLSPDDHVASNSPSVSITEEDDDAGDDSKGLRLVHLLMAAAEALSGAPKSRDLARVILVRLKELVSSHAAPHGSTMERLAAYFTDALQGLLEGAGGAHNNNNKHHHHYITSCGPHHHHRDDHHHQNDTLAAFQLLQDMSPYVKFGHFTANQAILEAVAHDRRVHIVDYDIMEGVQWASLIQALASNKTGPPGPHLRITALSRTGSGRRSIATVQETGRRLAAFAASLGQPFSFHHCRLEPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPESVASFLSGAKALKPRLVTLVEEEVASIVGGFVARFMDSLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARMGEEEERGSWGEWLGAAGFRGVPMSFANHCQAKLLIGLFNDGYRVEELGSNKLVLDWKSRRLLSASLWTSSSHSD* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0937 495 Pfam GRAS domain family 101 489 IPR005202 -
Gso6g0937 495 PANTHER SCARECROW-LIKE PROTEIN 26 13 489 IPR030028 -
Gso6g0937 495 MobiDBLite consensus disorder prediction 63 94 - -
Gso6g0937 495 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 489 IPR005202 -
Gso6g0937 495 ProSiteProfiles GRAS family profile. 92 489 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0937 Gso-Chr6 9008797 9010622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0937 88 490 GRAS Transcription Factor Family AT5G41920 35.135 2.10e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso6g0937 GRAS 1e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0937 - - gmx:100782300 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2104 4 51518414 51520316 Gso6g0937 6 9008797 9010622 GST