Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0936 ATGTCTCAAATCTGCACTTCGTCAAATTACACCATGAAACCCATCATAACCTTCTCTTGCATTCTCCTTTTCTTTACCACCATCTCAGCCCGCAGTTTTTCAGATTATATCACTCCAAATTTCACTGCCTCATACCTTGAGTTCATTGACAACTTTGGCACGTTCCTGTTTTCTCACAACAGAACATTCAAGGCTGCTATATTCAACCCCGGTGGCCAACAAACCAGTTTCTATCTATGTGTCATTCATGCTGCATCCAACACTATCATTTGGTCTGGTAACCGTGATGCCCCCATCTCAGATTCTGGCAAAATGCTTCTATCTTTCAAAGGGATCACAATTCTTGATGAACATGGGAACACCAAATGGTCAACACCATCACTGAAATCACAAGTGAATAGGCTTCAGCTGACAGAGATGGGAAATCTTGTGTTACTTGACAAGTCCAATGGTTCTCTCTGGGAGAGTTTCCAAAACCCAACAGACACAATTGTTATTGGACAGCGTTTACCTGTTGGAGCATCTTTGTCAAGTGCAGCATCCAATTCAGACTTGTCAAAAGGAAACTACAAGCTCACAATAACTTCCTCTGATGCAGTTCTGCAATGGTATGGACAGACATATTGGAAACTTTCAACGGACACAAGGGTCTACAAGAACTCAAATGACATGTTGGAATACATGGCCATAAACAACACAGGCTTTTACCTCTTTGGAGATGGTGGAACAGTTTTTCAGCTGGGGTTGCCACTGGCTAATTTTCGAATTGCCAAGTTAGGTACCTCTGGCCAGTTTATTGTCAACAGCTTTTCTGGCACTAATAACCTGAAGCAGGAGTTTGTGGGGCCAGATGATGGATGTCAAACTCCCTTGGCTTGTGGAAGAGCAGGTTTATGCACTGAGAACACTGTTTCCTCTTCACCTGTTTGTTCTTGTCCCCCAAACTTCCATGTAGGCTCAGGTACTTTTGGTGGTTGTGAGCCAAGCAATGGATCCTATTCTTTGCCACTTGCTTGTAAAAATTCTTCAGCTTTTTCATTTTTGAATATAGGGTATGTTGAGTACTTTGGCAATTTTTATTCTGATCCGGTTTTGTATAAAGTGAATTTATCTGCCTGTCAAAGTCTTTGTTCAAGTAACTGTTCCTGCTTGGGGATTTTTTATAAAAGCACATCTGGTTCTTGCTATATGATTGAGAATGAGTTGGGGTCCATTCAGTCAAGTAATGGAGGTGATGAGAGAGACATCTTGGGCTTCATTAAAGCCATTACGGTTGCATCTACAACTAGTAGTAATGATGGCAATGATGATAAGGAAAATTCTCAAAATGGGGAGTTTCCTGTGGCAGTTGCAGTGCTGTTACCAATCATTGGATTCATTATTCTGATGGCCTTAATTTTCCTTGTGTGGAGAAGATTGACACTCATGTCAAAGATGCAAGAAGTGAAACTAGGGAAAAACTCACCTTCTTCTGGGGACCTTGATGCCTTCTACATTCCTGGCTTACCCGCAAGGTTTGACTATGAAGAACTCGAGGAGGCTACAGAAAACTTCAAGACTCTAATAGGGTCAGGTGGGTTTGGAACCGTATACAAAGGTGTGCTTCCTGACAAATCCGTTGTGGCAGTGAAGAAAATAGGGAATATAGGAATTCAAGGGAAGAAGGACTTCTGCACTGAGATTGCAGTCATTGGAAACATCCACCACGTTAACTTGGTCAAACTCAAAGGCTTTTGTGCTCAAGGGAGACACCGCTTGTTGGTTTATGAGTACATGAACCGTGGTTCCCTTGACCGAAACCTCTTTGGTGGTGAACCGGTTTTGGAATGGCAAGAGAGGTTCGATGTGGCGCTTGGAACAGCACGTGGACTTGCTTACCTTCACAGTGGATGTGTACAAAAGATTATTCATTGTGACATCAAACCAGAGAACATTCTCTTGCAGGATCAGTTTCAGGCTAAGATATCTGATTTTGGACTCTCCAAACTCTTGAGTGCCGAACAGTCTGGTTTGTTCACAACAATGAGAGGCACACGTGGCTACCTTGCTCCGGAGTGGCTCACAAACTCTGCCATAACAGAGAAAACTGATGTGTATAGCTTTGGAATGGTGCTTCTTGAACTTGTCAGTGGAAGGAAGAACTGCTATTACAGGTCCAGAAGCCATAGCATGGATGATAGCAACAGTGGTGGAGGACATTCCTCAACCTCATCAACAACCGGGTTGGTTTATTTTCCTCTATTTGCATTGGAGATGCATGAGCAAAGGAGTTACCTTGAGTTGGCTGATTCAAGGCTTGAAGGACGTGTCACATGTGAAGAGGTGGAGAAACTGGTTCGTATTGCCTTGTGTTGTGCTCATGAAGAACCAGCGCTTAGGCCAAACATGGTCACTGTTGTTGGCATGCTAGAAGGTGGGACTCCATTGCCACACCCGAGGATTGAATCTTTGAACTTTCTGAGGTTTTATGGCCGTAGGTATACTGAGGCTTCTACTATAGCGGAAGAAAATGAGTATGGTTCTGTGATGCTTCAACAAGCGCGTAGTTCTACTACAAGCATGCCAAGTGATTCATCGACTCGTGGATTTTCTTACATGTCTTCGCAAAATATCTCTGGGCCAAGATAG 2628 0.4326 MSQICTSSNYTMKPIITFSCILLFFTTISARSFSDYITPNFTASYLEFIDNFGTFLFSHNRTFKAAIFNPGGQQTSFYLCVIHAASNTIIWSGNRDAPISDSGKMLLSFKGITILDEHGNTKWSTPSLKSQVNRLQLTEMGNLVLLDKSNGSLWESFQNPTDTIVIGQRLPVGASLSSAASNSDLSKGNYKLTITSSDAVLQWYGQTYWKLSTDTRVYKNSNDMLEYMAINNTGFYLFGDGGTVFQLGLPLANFRIAKLGTSGQFIVNSFSGTNNLKQEFVGPDDGCQTPLACGRAGLCTENTVSSSPVCSCPPNFHVGSGTFGGCEPSNGSYSLPLACKNSSAFSFLNIGYVEYFGNFYSDPVLYKVNLSACQSLCSSNCSCLGIFYKSTSGSCYMIENELGSIQSSNGGDERDILGFIKAITVASTTSSNDGNDDKENSQNGEFPVAVAVLLPIIGFIILMALIFLVWRRLTLMSKMQEVKLGKNSPSSGDLDAFYIPGLPARFDYEELEEATENFKTLIGSGGFGTVYKGVLPDKSVVAVKKIGNIGIQGKKDFCTEIAVIGNIHHVNLVKLKGFCAQGRHRLLVYEYMNRGSLDRNLFGGEPVLEWQERFDVALGTARGLAYLHSGCVQKIIHCDIKPENILLQDQFQAKISDFGLSKLLSAEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCYYRSRSHSMDDSNSGGGHSSTSSTTGLVYFPLFALEMHEQRSYLELADSRLEGRVTCEEVEKLVRIALCCAHEEPALRPNMVTVVGMLEGGTPLPHPRIESLNFLRFYGRRYTEASTIAEENEYGSVMLQQARSSTTSMPSDSSTRGFSYMSSQNISGPR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0936 875 Gene3D Phosphorylase Kinase; domain 1 497 591 - -
Gso6g0936 875 Gene3D - 51 167 - -
Gso6g0936 875 SMART serkin_6 516 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0936 875 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 18 875 - -
Gso6g0936 875 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 875 - -
Gso6g0936 875 Pfam D-mannose binding lectin 88 171 IPR001480 -
Gso6g0936 875 MobiDBLite consensus disorder prediction 846 875 - -
Gso6g0936 875 CDD STKc_IRAK 522 805 - -
Gso6g0936 875 CDD B_lectin 53 160 IPR001480 -
Gso6g0936 875 Pfam Protein kinase domain 519 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0936 875 SMART blect_4 47 160 IPR001480 -
Gso6g0936 875 SUPERFAMILY Protein kinase-like (PK-like) 494 803 IPR011009 -
Gso6g0936 875 PIRSF SRK 7 859 IPR024171 GO:0004674
Gso6g0936 875 CDD PAN_AP_plant 336 411 - -
Gso6g0936 875 ProSiteProfiles PAN/Apple domain profile. 339 421 IPR003609 -
Gso6g0936 875 ProSiteProfiles Bulb-type lectin domain profile. 40 158 IPR001480 -
Gso6g0936 875 ProSiteProfiles Protein kinase domain profile. 516 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0936 875 Gene3D Transferase(Phosphotransferase) domain 1 592 808 - -
Gso6g0936 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Gso6g0936 875 ProSitePatterns Protein kinases ATP-binding region signature. 522 545 IPR017441 GO:0005524
Gso6g0936 875 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 212 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0936 Gso-Chr6 8998721 9001797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0936 460 812 Receptor kinase-like Gene Family AT5G20050 40.162 2.67e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso6g0936 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0936 - - gmx:100305399 1491.48