Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0928 ATGGATGGGAAGCCTAACCCGTATTCCTCCTCCACGGACCTCCTCCGCGACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTTCAATGCAGTCCAATTGCATAAGACCAAGGCGCACGCTACTTCCTCAAAGAAGAGCATCTAGCACTTCTTCTTCTTCTTCCGATGTCACCAATTCTCAAGAAGAAGCTTCTTCCAAGGATTCGCTCAACGCCGTCGTCCCTTCTCAAAACCTAGACTCTCAGAAGAAAGTCCAGTTTTCAGTTCCAAGCAACGCTGCCTCGCAGGAAATGGAGTGGGTTGAAGGCAGCCAAATCGAAGCATGGTCGTCGTCGTCGTCGCTTGGATGCAACCAGCAGGAGAGTGTTCAGCAGGCGGGGATTGACGCGAGTTTGAAATGCGAGAGTGGAGTGAGTTCCGTGCTGCCGAAGAGAAGCGTGGTTACTCCGGATCATTTGCAGCAATTCAGAAGTTTTTTGAGTCAGCCAGCGACGCAATCTTCGGTGGTCGGACCTACTTGTGCCACAACTACATCTGTTCATTCAACTTCAGCGCCAATGCTGAATTCAACAACACGGTATTCTCATTTCCGTCAATATTGTGGCTCAAGTGTGGCTGCTGAGCCTTTGGGGGAGGTTAATGTTAATCCATGCCCTATAACTGAAGGGGTTGTGAAATCGATTGATGTTTCCATACAAGAAACCAATAGAATGCCAGTTGATCCGGGGGCAGAAGCTGAAGTCCGAGCTTCTGGTTCTTGTATTGATGATGCAGGGTCGTTATCTAAGGAGAGCAATCAATCTAAGGAGCAACAAGGGGGTGAGTTGAAAGAATCTGGCAATTCTAAGTATACTTCTTGTGATGATGGGAAAGGGAAAGAGGCTGTGGATGTTGCCACTGTACAAATGCAGGCTCCACTTCCCACAACCATAACCTCATCTTCAGATGTGAAGTTGGGGTCTTCTAAGGTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTACATTGGGTGCCCGGAAAAGAACTTATGACCCTGATTTGTTTTTCAAAGTCAACGGCAAGCTTTATCAGCGACTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAGGTGATTTCATCGGACTGTAGGATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAGCTACCAAACTATAGATGAAAACTGGCTTCGATTTTATTGGCAGCAAATTCTTTTAGCTGTCAACACTATTCATGAGGACCGGATTGTGCACTCAGACTTGAAGCCGGCTAACTTCCTCCTTGTCAAAGGCTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGACACAACCAACATCCAACGGGATTCACAGGTGGGCACTCTAAGCTACATGTCTCCAGAAGCATTTTTGTGTAATGAAACTGATGCGAATGGAAACATCATAAAGTGTGGGCGACCATCAGATATCTGGTCCCTGGGTTGCATCCTTTATCAAATGGTATATGGCAGGACACCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTTATAACAGATCCAAATCATAAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGGAAAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTCATCCATGTTTGCCCCAAGATCATAGCTGTAAATTGCTACAACTTATTTCTGAAACTTGTACATATGACCCTGAAGCATCCCAACTGTGTAGTCGCCTCCAACGGCTTCTTAGCGACCCACTTGAGAAAACAACTCGCTCACTAAATTCAGGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGAACTCTGTATTCAGCTGCACGAACGTTTGACAAATACTGAATACAAGTAG 2208 0.4493 MDGKPNPYSSSTDLLRDVQAALKRHRPLGSMQSNCIRPRRTLLPQRRASSTSSSSSDVTNSQEEASSKDSLNAVVPSQNLDSQKKVQFSVPSNAASQEMEWVEGSQIEAWSSSSSLGCNQQESVQQAGIDASLKCESGVSSVLPKRSVVTPDHLQQFRSFLSQPATQSSVVGPTCATTTSVHSTSAPMLNSTTRYSHFRQYCGSSVAAEPLGEVNVNPCPITEGVVKSIDVSIQETNRMPVDPGAEAEVRASGSCIDDAGSLSKESNQSKEQQGGELKESGNSKYTSCDDGKGKEAVDVATVQMQAPLPTTITSSSDVKLGSSKVEKREKAASSKGTLGARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGSYQTIDENWLRFYWQQILLAVNTIHEDRIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHKITYEPVSNPWLLDLMERCLAWDRNQRWRIPQLLQHPFLVPPVPSHPCLPQDHSCKLLQLISETCTYDPEASQLCSRLQRLLSDPLEKTTRSLNSGDQQLKLLSQMSELCIQLHERLTNTEYK* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0928 735 Pfam Protein kinase domain 358 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0928 735 SUPERFAMILY Protein kinase-like (PK-like) 352 661 IPR011009 -
Gso6g0928 735 MobiDBLite consensus disorder prediction 256 290 - -
Gso6g0928 735 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 5 703 IPR027084 GO:0004712|GO:0007093|GO:0051304
Gso6g0928 735 CDD PKc_Mps1 356 651 - -
Gso6g0928 735 SMART serkin_6 358 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0928 735 Gene3D Phosphorylase Kinase; domain 1 351 437 - -
Gso6g0928 735 Gene3D Transferase(Phosphotransferase) domain 1 473 654 - -
Gso6g0928 735 MobiDBLite consensus disorder prediction 1 73 - -
Gso6g0928 735 ProSiteProfiles Protein kinase domain profile. 358 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0928 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Gso6g0928 735 MobiDBLite consensus disorder prediction 308 338 - -
Gso6g0928 735 MobiDBLite consensus disorder prediction 321 338 - -
Gso6g0928 735 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Gso6g0928 735 PANTHER MIXED LINEAGE PROTEIN KINASE 5 703 - -
Gso6g0928 735 MobiDBLite consensus disorder prediction 34 73 - -
Gso6g0928 735 MobiDBLite consensus disorder prediction 259 282 - -
Gso6g0928 735 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0928 Gso-Chr6 8936471 8941037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0928 364 652 MAP Kinase Kinase Kinase AT4G08470 30.100 4.66e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Gso6g0928 Pkinase 1.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0928 K08866 - gmx:100780144 1451.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2112 4 51580490 51585305 Gso6g0928 6 8936471 8941037 GST