Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0922 ATGGCGGCTTCCGTCGACCAGCGTCCGTACCCCGGCCTCCACAATGGCGTCGTTCGGCCCCTCAAACCAGGCCCGGATATCCCGCGTCCCAAGAAGCTACCCCAGCCGCCGCCGCCACTCTCGGATTCCTCAAGCGACGAAGAAGAAGACACCACCTTGAACTTGAAGGACCTGATTCGCAAGGGAACAACGGAAGTTGAATCCTCCATTTTCGACCCGCGCGACGATGGAACCTCTGACCACTGGATCCAACGGAACTCTTCCCTTGTCCGTTTAACGGGAAAGCACCCGTTTAACTCGGAGCCACCCCTCCCTCGCCTCATGCAACACGGTTTCATCACCCCGGTCCCCCTTCACTACGTCCGCAACCACGGGCCAGTCCCCCGGGCCCGCTGGGAGGACTGGACCGTGGAAGTCACGGGCCTGGTCACCAGGCCCACACGCTTCACCATGGAGCAACTCCTCCACGATTTCCCCAGTCGCGAGTTCCCAGCCACACTCGTCTGCGCTGGGAACCGGCGGAAGGAACAGAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGGGCAGCCGCCATCTCCACTTCGGTGTGGCGCGGCGTGCCCTTGCGCACCCTGCTCAAGCGCTGCGGGATCTACACCCGCACCAAGGGCGCGCTCCACGTGTGCTTCGAAGGGGCCGAGGATCTGCCAGGTGGAGGTGGGTCCAAGTACGGAACCAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATTCTCGCCTACATGCAAAACGGGGAGCCTTTGTCCCCGGATCACGGCTTCCCCGTTAGAATGATAATACCCGGTTTCATTGGTGGCCGCATGGTCAAATGGTTGAAGCGCATCATTGTTACTACCGACCAATCTCAAAACTATTACCATTATAAGGATAACAGGGTACTCCCTTCTCACGTTGATGCCGAACTTGCCAATGCTCAAGCTTGGTGGTACAAGCCGGACTATATTATCAACGAGCTTAACATAAACTCCGTGATAACCACGCCTTGCCACGAGGAGATCTTGCCCATCAACTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGGTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAACGTGGCAAGTGTGCACACTGGACTGTCCGGAGAAACCCAACAAATATGGAAAGTACTGGTGTTGGTGTTTTTGGTCTGTGGAGGTTGAGGTTTTGGACCTGCTCGGAGCCAGGGAGATTGCGGTGCGTGCTTGGGACGAGGCCCTCAACACCCAACCTGAAAAGCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGAGTGAAAACCAATGTGTGCAGGCCCCACAAGGGTGAGATAGGTATAGTGTTTGAACACCCCACCCAACCAGGCAACCAATCCGGCGGATGGATGGCAAAAGAAAAACACCTAGAGAAATCATCTGAGTCCAACCCAACCCTCAAGAAGAGTGTCTCCTCCCCATTCATGAACACCACCTCAAAAACCTATACCATGTCTGAAGTCAGAAGGCACAACAACGCCGATTCGGCTTGGATCATAGTCCACGGTCATGTCTATGATTGCACCCGCTTCCTCAAAGACCATCCCGGTGGCACAGACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGAAGCCATCCACTCCGACAAAGCCAAGCAAATGCTTGAAGACTACCGAATCGGCGAGCTCACCACCACCTGCTACAACTCTGATTCTTCATCGTCAAACCCCTCCGTGCATGGCAGCTCCGACACCATCCCTTTGACCCCCATCAAGGAAGTGATTACACCAATGCGAAGCGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAGCTCATCTCCAAAACCTCCATCTCTCACGACGTTAGGCTTTTCCGCTTTGCCCTCCCCTCCGACGACCTACTCATGGGTTTGCCAGTTGGGAAGCACATATTCCTATGTGCCACCGTTGACGAGAAACTATGCATGCGAGCCTACACTCCAACAAGCAGCGTTGACGAAGTGGGATACTTCGACCTCGTCGTTAAGGTTTACTTCAAAGGGGTGCACCCTAAGTTCCCCAACGGTGGGATCATGTCTCAACACTTGGACTCTCTCCCCATTGGTTCTGTCTTGGACGTGAAAGGCCCACTTGGCCACATTGAATACACTGGCAGAGGAAACTTCCTCGTTCATGGGAAACCAAGGTTTGCCAAGAGGCTAGCCATGTTGGCTGGTGGCACAGGAATCACACCCATTTACCAAGTGGTTCAAGCCATTCTAAAGGATCCAGAGGACTGCACCGAGATGCATGTGGTTTACGCGAACCGAACCGAGGATGATATATTGCTGAAGGAAGAGCTTGATGAGTGGGCTAAGAAGTATGATAGGTTGAAGGTGTGGTACGTGATACAAGAAAGCATAAGAGAAGGGTGGGAATACAGTGTGGGATTCATCACTGAAAGTATCCTGACGGAGCATATTCCAAATGCATCTCCTGATACCTTGGCATTGACTTGTGGACCACCACCTATGATTCAATTTGCAGTCCAGCCGAATTTGGAGAAGTTGGGCTACGACACCCAGAATAACTTGCTCGTGTTTTAG 2673 0.5365 MAASVDQRPYPGLHNGVVRPLKPGPDIPRPKKLPQPPPPLSDSSSDEEEDTTLNLKDLIRKGTTEVESSIFDPRDDGTSDHWIQRNSSLVRLTGKHPFNSEPPLPRLMQHGFITPVPLHYVRNHGPVPRARWEDWTVEVTGLVTRPTRFTMEQLLHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRTLLKRCGIYTRTKGALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNGEPLSPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTDQSQNYYHYKDNRVLPSHVDAELANAQAWWYKPDYIINELNINSVITTPCHEEILPINSWTTQMPYFIRGYAYSGGGRKVTRVEVTLDGGETWQVCTLDCPEKPNKYGKYWCWCFWSVEVEVLDLLGAREIAVRAWDEALNTQPEKLIWNVMGMMNNCWFRVKTNVCRPHKGEIGIVFEHPTQPGNQSGGWMAKEKHLEKSSESNPTLKKSVSSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKQMLEDYRIGELTTTCYNSDSSSSNPSVHGSSDTIPLTPIKEVITPMRSVALNPREKIPCKLISKTSISHDVRLFRFALPSDDLLMGLPVGKHIFLCATVDEKLCMRAYTPTSSVDEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVHGKPRFAKRLAMLAGGTGITPIYQVVQAILKDPEDCTEMHVVYANRTEDDILLKEELDEWAKKYDRLKVWYVIQESIREGWEYSVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQNNLLVF* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0922 890 CDD cyt_b5_reduct_like 639 890 - -
Gso6g0922 890 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 548 555 IPR018506 GO:0020037
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 551 561 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 686 693 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 764 783 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 790 799 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 802 813 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 834 850 IPR001709 GO:0016491
Gso6g0922 890 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 858 866 IPR001709 GO:0016491
Gso6g0922 890 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 634 746 IPR017927 GO:0016491
Gso6g0922 890 Gene3D Translation factors 626 740 - -
Gso6g0922 890 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 515 594 IPR036400 -
Gso6g0922 890 Gene3D - 741 890 IPR039261 -
Gso6g0922 890 MobiDBLite consensus disorder prediction 1 51 - -
Gso6g0922 890 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 890 IPR001834 GO:0016491
Gso6g0922 890 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 517 592 IPR001199 -
Gso6g0922 890 SUPERFAMILY E set domains 335 462 IPR014756 -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 665 676 - -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 686 693 - -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 731 745 - -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 764 783 - -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 802 813 - -
Gso6g0922 890 PRINTS Cytochrome B5 reductase signature 858 866 - -
Gso6g0922 890 Gene3D - 335 510 - -
Gso6g0922 890 MobiDBLite consensus disorder prediction 23 41 - -
Gso6g0922 890 PIRSF Nitr_rd_NADH 25 889 IPR012137 GO:0006809|GO:0042128|GO:0050464
Gso6g0922 890 Pfam Oxidoreductase molybdopterin binding domain 124 303 IPR000572 -
Gso6g0922 890 Pfam Oxidoreductase FAD-binding domain 639 745 IPR008333 -
Gso6g0922 890 SUPERFAMILY Riboflavin synthase domain-like 627 746 IPR017938 -
Gso6g0922 890 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 73 333 IPR036374 -
Gso6g0922 890 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 885 IPR039261 -
Gso6g0922 890 Gene3D - 513 594 IPR036400 -
Gso6g0922 890 PRINTS Cytochrome B5 signature 542 552 IPR001199 -
Gso6g0922 890 PRINTS Cytochrome B5 signature 552 566 IPR001199 -
Gso6g0922 890 PRINTS Cytochrome B5 signature 567 574 IPR001199 -
Gso6g0922 890 PRINTS Cytochrome B5 signature 579 591 IPR001199 -
Gso6g0922 890 Pfam Oxidoreductase NAD-binding domain 765 872 IPR001433 GO:0016491
Gso6g0922 890 SMART Cyt_b5_2 520 592 IPR001199 -
Gso6g0922 890 CDD eukary_NR_Moco 75 460 - -
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 90 104 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 112 128 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 165 176 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 176 188 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 191 206 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 249 265 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 282 295 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 333 345 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 364 378 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 378 390 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 405 415 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 430 442 IPR008335 GO:0016491
Gso6g0922 890 PRINTS Eukaryotic molybdopterin domain signature 443 456 IPR008335 GO:0016491
Gso6g0922 890 Pfam Cytochrome b5-like Heme/Steroid binding domain 521 591 IPR001199 -
Gso6g0922 890 PANTHER NITRATE REDUCTASE 50 890 - -
Gso6g0922 890 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 141 176 IPR022407 GO:0043546
Gso6g0922 890 Gene3D - 74 325 IPR036374 -
Gso6g0922 890 Pfam Mo-co oxidoreductase dimerisation domain 331 462 IPR005066 GO:0016491|GO:0030151
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0922 Gso-Chr6 8851517 8856129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0922 627 881 NADPH P450 reductases AT5G17770 39.535 6.70e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0922 K10534 - gmx:732634 1777.3