Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0905 ATGAAAATGGACATATACGAGCCATTTCAGCAAGTTAGCCTGTGGGGGGACAACTTTAAACTTGATGGCGGTCTGAATTCAATTGCTTCCCCAATGTTAATGGTTGACAGTACTAGTGTGGAGAACAAGTCTGAGGATATTCCTCAGGAATCAAGAGAGCCTTCTGGTTCTGGAGCCGATCAAGAGGCTACAAATAAAGAAGTTAACAAGATGCTAAGACGCCTAGCTCAGAATCGAGAGGCTGCTCGGAAAAGTAGGCTGCGGAAAAAGGCTTACGTTAAACAATTAGAATCAAGCCGTTCGAAGCTCATGCAACTGGAGCTGGAAATTGGGAAAGCAAGAAAGCAGGGTCTGTATATGGGCACTGTATTAGATGCCGGCTATATAGGATCAACATCAGAAACAATAAATCCAGGGATTGTGGCTTTTGAAATTGAATATGGACAATGGGTTGAAGAGCAACAAAGGCGGAACGAAGAACTTAGACATGCATTTCAAGCGCAAGCATCTGATGTACAGCTGAATGTAGTGGTTCAGAGTGTCTTAAACCATTACTCAAATCTTTTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTCCTCTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATTTTCCTTTGGATTGGAGGCTCCCGTCCATCACAGCTTCTAAACATCATCGTGCCACAACTTGAGCCTTTGACTGATCAACAAATTGTTAGTATTAGCAACCTCCGTCTATCGTCTCAACAAGCTGAAGATGCTCTTTCACTAGGATTGGAAAAACTTCAGCAGAGTTTGGTCCACGACATGGCAGTTGATTCACTGGGTGTAGGAAACTTCGGACTTCAGATGGTTCTTGCGATGGAAAAATTTGAGGCACTAGAAGGTTTTGTAATCCAGGCAGATCACCTTAGGCAACAAACTCTGCTTCACATGTCACGCATCCTTTCAACTCACCAAGCTGCTCGCGGCTTACTGGCTCTCGGGGAATACTTTCATCGTCTTCGCACTCTTTGCTCTCTTTGGTATGCTCGTCCATATGACCTTGCCTAG 1068 0.4448 MKMDIYEPFQQVSLWGDNFKLDGGLNSIASPMLMVDSTSVENKSEDIPQESREPSGSGADQEATNKEVNKMLRRLAQNREAARKSRLRKKAYVKQLESSRSKLMQLELEIGKARKQGLYMGTVLDAGYIGSTSETINPGIVAFEIEYGQWVEEQQRRNEELRHAFQAQASDVQLNVVVQSVLNHYSNLFRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLTDQQIVSISNLRLSSQQAEDALSLGLEKLQQSLVHDMAVDSLGVGNFGLQMVLAMEKFEALEGFVIQADHLRQQTLLHMSRILSTHQAARGLLALGEYFHRLRTLCSLWYARPYDLA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0905 355 Coils Coil 65 85 - -
Gso6g0905 355 PANTHER FACTOR TGA7, PUTATIVE-RELATED 3 352 - -
Gso6g0905 355 SUPERFAMILY Leucine zipper domain 70 105 IPR046347 GO:0003700|GO:0006355
Gso6g0905 355 MobiDBLite consensus disorder prediction 36 64 - -
Gso6g0905 355 ProSiteProfiles DOG1 domain profile. 140 350 IPR025422 GO:0006351|GO:0043565
Gso6g0905 355 Gene3D - 69 118 - -
Gso6g0905 355 Coils Coil 151 171 - -
Gso6g0905 355 Pfam Seed dormancy control 159 232 IPR025422 GO:0006351|GO:0043565
Gso6g0905 355 SMART brlzneu 66 126 IPR004827 GO:0003700|GO:0006355
Gso6g0905 355 PANTHER TRANSCRIPTION FACTOR TGA9 3 352 - -
Gso6g0905 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 73 88 IPR004827 GO:0003700|GO:0006355
Gso6g0905 355 Coils Coil 89 116 - -
Gso6g0905 355 Pfam bZIP transcription factor 70 103 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0905 Gso-Chr6 8683561 8688464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0905 3 351 Calmodulin-binding Proteins AT1G22070 55.135 1.00e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso6g0905 DOG1 1.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0905 K14431 - gmx:100775332 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1408 14 43670060 43675608 Gso6g0905 6 8683561 8688464 PCT
Gso13g0595 13 19594823 19600156 Gso6g0905 6 8683561 8688464 PCT
Gso6g0905 6 8683561 8688464 Gso14g1408 14 43670060 43675608 PCT
Gso6g0905 6 8683561 8688464 Gso13g0595 13 19594823 19600156 PCT