Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0895 ATGTCTTCAATGGGTCCTCCTGCTGATGAAAATCTTGAAACAAAAGAGATCGATCTCAGAAGTATGTCATCTTCTTCACTTGGTCAGGCACCACAAGCCCACAAAGTAGCAATTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAATCCACTATAAAAGAAACATTCTTTTCTGATGATCCTCTAAGACCCTTCAAAGATCAACCTAGATCAAGGAAGATTAGGCTCGGTATCGAGGCCATATTCCCAATACTTAGTTGGGGGAGAAGTTACAACCTTAAAAAATTTAGAGGAGATATAATATCCGGTCTCACTATTGCAAGTCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTACTCCAGTTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCAGTGGCAGTGGTTTCACTCTTGTTGGGGACCTTACTAAGTAATGAGATTGATCCTAAAACAAATCCAACAGAATATCAGCGACTTGCTTTTACAGCAACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGTGTTCTTAGGTTAGGATTCTTGATTGACTTCCTATCACATGCTGCTATTGTTGGTTTTATGGGGGGAGCTGCTATCACAATTGCCCTCCAACAGCTTAAGGGTTTCCTTGGCATTAAAACTGCACACTTCACAACGGACACTGATATTGTCCATGTGATGCGTTCAGTATTCTCAGAAGCCCATCATGGATGGAACTGGCAAACTATACTCATCGGAGCTAGCTTTTTGGGTTTTCTTCTGGTTGCCAAATATATTGGAAAGAAAAACAAGAAATTCTTCTGGGTGCCAGCAATTGCTCCATTGATATCCGTTATTTTATCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGACATTGTAAGAAAAATAGAAAAAGGCATCAATCCTTCATCTGTTAAAGATATTTATTTTACCGGAGAATACCTTGGAAAAGGTTTTAAAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAATTGGATGGAAACAAAGAAATGGTGGCATTAGGAACAATGAATGTTGTTGGTTCCCTGACTTCGTGTTATGTAGCAACAGGTTCTTTCTCTCGGTCCGCGGTAAATTACATGGCAGGCTGCCAAACTGCAGTCTCTAATATTGTGATGTCAGTGGTTGTGTTATTAACCCTGGAATTCATCACTCCTCTTTTCAAGTACACCCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCAGCCTTGTAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGATTTTGTTGCTTGCATGGGTGCCTTCTTTGGGGTTGTTTTTGTCTCGGTTGAGATAGGACTTCTAATTGCTGTCTCTATTTCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCCCGAACTGCTATTCTAGGGAAGATTCCTAGGACTACTGTCTACAGAAACATTCAACAATATCCAGAAGCTAGTAAGATTCCAGGTGTACTGATTGTAAGAGTCGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGACATTAAGATGGTTGATGGACGAAGAAGAACAAGAAAAAGGAGACTACCGCACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTTACCGACATAGACACAAGTGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTGAGAAGAAGGGTGTTGAGCTTGTTTTGGCAAATCCTGGGTCAGCAGTGACAGACAAGCTTTACGCATCCAGTTTTGCAAACACGATTGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTATTGCATATTGTTCTCCAAAGGTGGTTGAGGACCCTTGA 1986 0.4094 MSSMGPPADENLETKEIDLRSMSSSSLGQAPQAHKVAIPPRQNLFKEFQSTIKETFFSDDPLRPFKDQPRSRKIRLGIEAIFPILSWGRSYNLKKFRGDIISGLTIASLCIPQDIGYAKLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPKTNPTEYQRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTAHFTTDTDIVHVMRSVFSEAHHGWNWQTILIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVILSTFFVFITRADKQGVDIVRKIEKGINPSSVKDIYFTGEYLGKGFKIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVLLTLEFITPLFKYTPNAILSAIIISAVISLVDYEAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKIPGVLIVRVDSAIYFSNSNYVKERTLRWLMDEEEQEKGDYRTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKKGVELVLANPGSAVTDKLYASSFANTIGEDKIFLTVAEAIAYCSPKVVEDP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0895 661 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g0895 661 PANTHER SULFATE TRANSPORTER 13 661 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso6g0895 661 Coils Coil 566 586 - -
Gso6g0895 661 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 13 661 - -
Gso6g0895 661 Pfam STAS domain 531 649 IPR002645 -
Gso6g0895 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Gso6g0895 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Gso6g0895 661 Pfam Sulfate permease family 96 478 IPR011547 GO:0016021
Gso6g0895 661 TIGRFAM sulP: sulfate permease 83 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso6g0895 661 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Gso6g0895 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Gso6g0895 661 Gene3D STAS domain 510 657 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0895 Gso-Chr6 8550602 8555400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0895 1 660 Inorganic Solute Cotransporters AT1G22150 73.333 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0895 K17470 - gmx:100804208 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1426 14 44300630 44307144 Gso6g0895 6 8550602 8555400 PCT
Gso13g0606 13 19889352 19894520 Gso6g0895 6 8550602 8555400 PCT
Gso6g0895 6 8550602 8555400 Gso14g1426 14 44300630 44307144 PCT
Gso6g0895 6 8550602 8555400 Gso13g0606 13 19889352 19894520 PCT