Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0832 ATGAGGAAGAAAAGGAAAGGAAGCAAAACTGATGGGTCTGCGGATCTGGCTGTTATTTTGGCTCCTAATCATGGCTCTGCTTCGTCGAATTTGAAGTCCCATTACTCGCTGGAAGATTGTTGTAGGCTGAAGAAGAGGTGTTGTAAGGAGGAGGATGCTGACACTGAGCCGGCTACTTCCTTTACGAGGAGGCTTGCTGGCATTGCTACTGCCCCACCTTGTGGGACGTCGTCTTTGATCACGCCGGGGAGAGGGCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATCGAGGATGATTATGTTTCTGGGGAGACAATCGGGCAAGGCAAGTTCGGGTCTGTTTGGTTGTGTAGGTCAAAGGTTAGTGGAGCTGAATATGCGTGTAAGACCCTGAAGAAAGGGGAGGAGACGGTTCATCGAGAGGTTGAGATCATGCAACACTTATCCGGACATTCTGGGGTTGTTACACTGCAAGCTGTTTATGAGGAAGCTGAATGCTTTCATCTTGTGATGGAACTGTGCTCTGGTGGTCGGCTCATCGATGGGATGGTTAAGGATGGTCTGTATTCGGAACAGCGGGTTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCCGAGAATATTCTCCTCACTGCATCCGGAAAAATAAAGCTTGCAGATTTCGGCTTGGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCAGGAAGCCCTGCCTATGTTGCCCCAGAAGTATTGTTAGGCAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACTGTCAAATTAGATTTCCAAAATGGAATGTGGAAATCAATATCTAAACCTGCACAAGACCTTATTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATATCAGCTGAAGAAGTACTTAGGCATCCATGGATATTGTTCTACACGGCAAATACATTGAAAATGCTGCCCATCAAAACAAAATTGAAGAACCAAATTGGTGCCACATGCCAACAGCTTGTTGCTGTAAGGGAACCAAGGTTAGGAGGAAATAGGATAGATAATTACTCACTTAGCGAGGGTTCGTCCTCTGAAAGTTGCTATTCAGATGATCAGGATGAATGTGTGTTGATTGATGTGCTTGCCTCTGCAATTTCACACGTGAGGATATCTGAACCAAAGAGGAGCAGGGTGTGTGGTCCCACAGGCCCGATAGTTCAACAAGGTTCATCTAACATGAAGCCTAACAACCTCTGTAAAGCATTTTGA 1404 0.458 MRKKRKGSKTDGSADLAVILAPNHGSASSNLKSHYSLEDCCRLKKRCCKEEDADTEPATSFTRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSKVSGAEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDGMVKDGLYSEQRVANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQNGMWKSISKPAQDLIGRMLTRDISARISAEEVLRHPWILFYTANTLKMLPIKTKLKNQIGATCQQLVAVREPRLGGNRIDNYSLSEGSSSESCYSDDQDECVLIDVLASAISHVRISEPKRSRVCGPTGPIVQQGSSNMKPNNLCKAF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0832 467 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0832 467 CDD STKc_CAMK 108 356 - -
Gso6g0832 467 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Gso6g0832 467 SUPERFAMILY Protein kinase-like (PK-like) 100 374 IPR011009 -
Gso6g0832 467 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0832 467 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 459 - -
Gso6g0832 467 Gene3D Transferase(Phosphotransferase) domain 1 100 400 - -
Gso6g0832 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Gso6g0832 467 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0832 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0832 Gso-Chr6 7922461 7927045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0832 101 357 EF-hand Containing Proteins AT4G35310 43.820 6.28e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso6g0832 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0832 - - gmx:100788327 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0825 4 8744417 8747692 Gso6g0832 6 7922461 7927045 GST
Gso14g1509 14 46417634 46420944 Gso6g0832 6 7922461 7927045 PCT
Gso2g1800 2 41792095 41795353 Gso6g0832 6 7922461 7927045 PCT
Gso6g0832 6 7922461 7927045 Gso14g1509 14 46417634 46420944 PCT
Gso6g0832 6 7922461 7927045 Gso2g1800 2 41792095 41795353 PCT