Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0817 ATGCCGGAGAAGAAGAGCAAGAAAGTCTCCTTCACCGAAGAAGATGCTGTGACATTCATACAGAGGTACGACGCAACTACGGTGCTCACTTTACTTCAGGAAGTGGCGCATTACTCTCAACCGAAGATTGATTGGTTCGAGTTGGTGGAGAAAAGTGCGACTGGGATTTCTAACGCCAGGGAGTATCAAATGCTATGGCGGCACTTGGCGTATCGCCATTCTTTGCCTGAAAACTTCGAAGATGGGGCTGAACCTTTGGATGACGATAGTGACCTAGAGTGTGAGCTAGAAGCATTACCCCCTGTAAGTTTGGAATGTGCATCAGAGGCTGCTGCATGTGTGAAGGTAATGATTGCTTCTCGTACACTGAGTGAATCTGCCCCTAGTAGCTCAACAATCGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTAGAACTCGTATTGAAAATTCACAACCCTCTAATTTGATGCAAGGGACAAGCTTTATTTTTCCAGTTACCGTTCAGAGACAGACACTGCCAACTATATCATCGACAGATGGTATAGAAACCAAGGGAATAGTTGGTGGTAATATGGCTTCCAAAAGAAAAAGAAAGGCATGGTCAGAAGAAGAGGACATGCAGCTACGAGCTGCTGTTCAAAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACGACTTTCCTATTAAGAGAAGTGCTACACAGTTGGCCCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGTTGTACAAATACAGGAACTGTAACCAGCACACAGTATACTACTGCTGAACAACTGGCAACACGACACTCTTTATCTTTAGCCCTTGACATGCCATTCAAAAAGTTGACTGCTCCTGGAATGACTGATGTTAAGCCATCCACATCAGTTAAAAATCAAGTGCAGATTAGAAATACTACAGAGAAGGTTGCCAGTAGTTTTGTACCACCTCAACAAGCTTTGTTGGGATCTTCTGATTTGCATGCAAAATCCAAATTAGCAGATGAAAAACCAGTCTTGAAGGGTAATCTAATTTCAGATCCTGTGGTAAAATCTGCCACAGCAACTTTGGGGACACGAATTGATCCCCTTTCAAATACTATATCACAAATTAAAGTTGCTCAAGTAAAAAATGCCATAGATACCAAGCCAGCAGTCAGCTCTTTGACAAAGCCATCCATTTCTACCAATTTGCCTTCTGATCCAAAGAACAAACATGTTACCCCTTTGGCTGATAAAGGTGCTCAAGTAAAAAATGCCGTGGATACTACTGAGCCTGCTGTTAGCTCTTTGACAAAGCCATCTATTTCTACCAATTTGCCTTCTGACCCAAAGAACAAACATGCTACCCCTTTGGCTGATAAAGTTCCATTGAAGCAAGATGTTAATCCCACAAAAGAGTTACAAGTTTCTAATCCGAGCACCATACCAAAAGAGAAGTTACAAGAAAATGAGCCTCCTAAAGTTACCACTGGAAGCCAGGTTGATAGCAACCCAGAGAAGGGAAGATTAGAAAAAGGTCAAGAGACGAGCATACCTCTTGTTAAAATTAGTGGTGGTGAGGAAGTTTCAAAAGATAAAGCAAATCAAGGAGTAGTGTGTGAAGAGCAAGGAAGTGTTAAGAAGGCTACTGAGAAAAACAACATTGACAAGGGGAGTCAAAGTTTAGAGCAAGACAAGAAGATAAATTCAATTAATCAAAGTTCAAATGATCAAAACGGGAATGATAAACATGTAAATTTGCCAGTACAAGATGAACTCAGCCAAAGTGCCAAGGTAGTAAAAAATGATGGGGAATGTTGA 1821 0.4179 MPEKKSKKVSFTEEDAVTFIQRYDATTVLTLLQEVAHYSQPKIDWFELVEKSATGISNAREYQMLWRHLAYRHSLPENFEDGAEPLDDDSDLECELEALPPVSLECASEAAACVKVMIASRTLSESAPSSSTIEAPLTINVPVCHSSRTRIENSQPSNLMQGTSFIFPVTVQRQTLPTISSTDGIETKGIVGGNMASKRKRKAWSEEEDMQLRAAVQRWGEGNWATMAKGDDFPIKRSATQLAQRWSILRKKDGCTNTGTVTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGMTDVKPSTSVKNQVQIRNTTEKVASSFVPPQQALLGSSDLHAKSKLADEKPVLKGNLISDPVVKSATATLGTRIDPLSNTISQIKVAQVKNAIDTKPAVSSLTKPSISTNLPSDPKNKHVTPLADKGAQVKNAVDTTEPAVSSLTKPSISTNLPSDPKNKHATPLADKVPLKQDVNPTKELQVSNPSTIPKEKLQENEPPKVTTGSQVDSNPEKGRLEKGQETSIPLVKISGGEEVSKDKANQGVVCEEQGSVKKATEKNNIDKGSQSLEQDKKINSINQSSNDQNGNDKHVNLPVQDELSQSAKVVKNDGEC* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0817 606 MobiDBLite consensus disorder prediction 545 563 - -
Gso6g0817 606 MobiDBLite consensus disorder prediction 428 451 - -
Gso6g0817 606 MobiDBLite consensus disorder prediction 564 597 - -
Gso6g0817 606 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
Gso6g0817 606 MobiDBLite consensus disorder prediction 391 409 - -
Gso6g0817 606 MobiDBLite consensus disorder prediction 391 606 - -
Gso6g0817 606 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 601 - -
Gso6g0817 606 MobiDBLite consensus disorder prediction 470 485 - -
Gso6g0817 606 CDD SANT_TRF 202 251 - -
Gso6g0817 606 SMART sant 200 252 IPR001005 -
Gso6g0817 606 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 601 - -
Gso6g0817 606 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Gso6g0817 606 Pfam Myb-like DNA-binding domain 201 246 IPR001005 -
Gso6g0817 606 Gene3D - 194 255 - -
Gso6g0817 606 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0817 Gso-Chr6 7706628 7715597 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso6g0817 Myb_DNA-binding 4.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0817 - - gmx:100799956 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0811 4 8408759 8418808 Gso6g0817 6 7706628 7715597 GST
Gso2g1827 2 42205025 42209702 Gso6g0817 6 7706628 7715597 PCT