Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0807 ATGGTCTGTCCGGGTTCAACGCAATTGTCTCATGATGTTAGGCTCAACAGTAATATTGGATTCTGTAGTTTCCATCACAATCGGATGGGGGTTGGTCGATTACATTTGGTCACTATAAATCTTTCACCAAGTAATTTGAAGCAAGACTCTTCAGCATTCCATCTTTTAAGTAGACTACATGCCCCAATAAGGCATGTGCCTTCCAGATGTAATGTTTTCATTTGTCGGTCTGTCCTAATACCTGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTAGTGTTATTTTAACAAGGTCATATGATGCTCTACAAGGAAACCCTATTTTCCTTCAATTGATCCCAGCCATTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGTCTCAGCAGGGTTTTGTTCCTTCAGAGTACTGACATTAGTTGGAAGAAAAGTAGTTCGCAATCTATTATGACATCTTATATTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTTGTATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAGCGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCGCAAAAATTCTTTCTGGAGGGAAATGACTCCAGTGGTGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATATACTGCTGTATGGGTTGCTGCTGTTTCGTTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTGGCAGGTCGTGAGATATTTACAAACTTTCTTTCGAGCATAATGATCCATGCAACTCGGCCATTTATAGTAAACGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATCATCAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAACCACAAGTTTACAGTAAATGTTGTGAGAAATCTGAGCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAGTTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAAAATCCTCAAGTAGAGCAGCAAAAATTACACAGAAGGGTCTTTTTGGAGAATGTCAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTGGTCAGTCATCATCGAGCCAGGCTAGCCACTCCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTGACTCGGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCTAGAGCAGCAAATCGTCCATTTCTACTGATAGAACCACCGTATAAAGTTAATGGCGAAGATAAAGTTAAGGCTTCAACACGTTCAACTCGTGCAAATGAGGAAAAAGATTCCAAAATTGATGAAACCATGGCATCTGACACCAAAGAAGATGAGAATTTTACAGCAACATCAACCTCCTCACCTGATGTAATTTCCAAGGATAAATCCAAGTCATTGTCTGATGCCCAGCCTAAAAAGGAAAATGCAGTAGATGCAGGAAAGGGAACTACAGTTCCTGTATCTAAAAACCTTGTTCAAAGTGCTGTTCCTGAAGCCTCTCTTGCTACTACCCAAGAGATCACTTCTGCAACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTGTCTTTGCCATCAGTTAGGCCTTCCTTGGAAGAGAACATTCTTCTTGGGGTTGCCATAGAAGGCTCAAAACGAACTCTTCCAATTGAGGGAGAAATGACTCCATCTCCTATGCCTGCAGAGTCACAAGAATTTGCTGTTCAACGGAATGGGGGTGGACCTCCGGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTTCCAACTGGTAAACAGAATGACTAG 2046 0.4228 MVCPGSTQLSHDVRLNSNIGFCSFHHNRMGVGRLHLVTINLSPSNLKQDSSAFHLLSRLHAPIRHVPSRCNVFICRSVLIPGGGSGTPLMKSASVILTRSYDALQGNPIFLQLIPAIGIIAFAVCGLEPLLRLSRVLFLQSTDISWKKSSSQSIMTSYIQPLLLWTGAMLVCRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKVNNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSRAANRPFLLIEPPYKVNGEDKVKASTRSTRANEEKDSKIDETMASDTKEDENFTATSTSSPDVISKDKSKSLSDAQPKKENAVDAGKGTTVPVSKNLVQSAVPEASLATTQEITSATSSQSKQDEEKSSVSLPSVRPSLEENILLGVAIEGSKRTLPIEGEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQSSFPTGKQND* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0807 681 MobiDBLite consensus disorder prediction 583 614 - -
Gso6g0807 681 Gene3D - 192 296 - -
Gso6g0807 681 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Gso6g0807 681 MobiDBLite consensus disorder prediction 545 559 - -
Gso6g0807 681 MobiDBLite consensus disorder prediction 498 526 - -
Gso6g0807 681 MobiDBLite consensus disorder prediction 498 567 - -
Gso6g0807 681 MobiDBLite consensus disorder prediction 583 681 - -
Gso6g0807 681 MobiDBLite consensus disorder prediction 527 544 - -
Gso6g0807 681 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Gso6g0807 681 Gene3D - 298 353 IPR023408 -
Gso6g0807 681 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 673 IPR045042 -
Gso6g0807 681 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0807 Gso-Chr6 7636128 7645736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0807 9 654 Mechanosensitive Ion Channel Family AT1G58200 56.444 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0807 K22047 - gmx:100777815 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0803 4 8323043 8329380 Gso6g0807 6 7636128 7645736 GST