Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0806 ATGATGTCGTGCTCATCGCGTGACCTCGGACTTCACTTCACTTCAATTAGGTTGTCTCGCGACGTCAGGCTTTACAGTAATAATGGAAACTGTAGCTTTTGTCATAAACCTCTGCGTGGCGATCGATTATGTTTTGTTGCCATCAGTCTTTTGCCACATGGTTTGAGGCAGGATTCTTCAGCACTACATTCCAGATTACGGACCCCACTTAGGCCTGTACCTTTGAGATGTAATGCTTTGCCGTGGCGGTGTTCATTAATGCCAGCTGGTGGGTGTGAGACCCCACTTGTGAAAGTGGCTGCTGTTTCTTTGTCAAGGTCATATAATGCTATAGCAGGAAAACCAAGTGTGATTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCTGTTTTTGGTCTTGAGCCGCTCCTACGCCTGAGCAGGAATCTTTTTCTCCAAGAAAGGACAGATTGGAAGAAAAGTAGTTCACATTATATTTTGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTCATCTGCAGGGATTTGGATCCACTAGTCCTACCATCAGAAACCAGTCAAGCTATTAAGCAACGGCTGCTGAGTTTTGTACGAACATTGTCAACTGTGCTTACATTTGCTTACTGTTCTTCAAGCTTAATTCGACAAGCACAAAAAATTTGTATGGAGACAAATGACTCCAGTGATGAAAGAAATATGAGAATTGATTTTACTGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCTACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGCGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAGATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATTATAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACAGAAGGGTTTTTCTAGAGAATATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCCTGCTTTGTTAAAACTAGACATTCTGAAGAGTACCTCCGTGTAAAGGAAGCAATCCTCTTGGATCTTCTCAGAGTTATCAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATACTGATTTAGATGTTGATCCATTTGATGACACCATTCCCACTCGTTCCAGATCAAAGAATAACCGTCCTTTCCCACTGATAAATCCACCTTATAAAGTTAAGCCTTCAACTACTACAAATGAGGACAAAGATACTAAGATTGATGAAACCTTGCCATCTGACTTCAAAGTAGAACGTGACAAATTTGCTGCGACATCGAGTTCAGTCCAGAAGACCTCCAAATCCCAAAAGCTCAAAAAGGAAAGAGTAGGAAGTTCAGAAAAGGGAACAACATCCAAAAATTTGTCAAAATCCAACGAGTTTGGTTCTGGAGAGACTACTTCACCATCAAAACTAGATGAAGAGAAATCTGTTATGTCATCATCATCAGCTAGTCACTCCTTGGAAGAGAATATTGTTCTTGATGCTGCCCTGCTGGGCTCAAAGAGAACTCTTGCAATTGATGAAGAATTGATTCAATCTATCCCTGCAGAACCACAGGAAGTTGCAGTCCATCAGGATGGGAGTGAACCTCCTATTTCCAAGGATAAGAAGGATGGTGAGATGTCTTCATTTCCTACTCCTAAACAAAAGGATTAG 1983 0.414 MMSCSSRDLGLHFTSIRLSRDVRLYSNNGNCSFCHKPLRGDRLCFVAISLLPHGLRQDSSALHSRLRTPLRPVPLRCNALPWRCSLMPAGGCETPLVKVAAVSLSRSYNAIAGKPSVIQLIPALGIIGFAVFGLEPLLRLSRNLFLQERTDWKKSSSHYILTSYFQPLLLWTGVMLICRDLDPLVLPSETSQAIKQRLLSFVRTLSTVLTFAYCSSSLIRQAQKICMETNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQKKLHRRVFLENIDPENQALMILVSCFVKTRHSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMCSDTDLDVDPFDDTIPTRSRSKNNRPFPLINPPYKVKPSTTTNEDKDTKIDETLPSDFKVERDKFAATSSSVQKTSKSQKLKKERVGSSEKGTTSKNLSKSNEFGSGETTSPSKLDEEKSVMSSSSASHSLEENIVLDAALLGSKRTLAIDEELIQSIPAEPQEVAVHQDGSEPPISKDKKDGEMSSFPTPKQKD* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0806 660 MobiDBLite consensus disorder prediction 623 660 - -
Gso6g0806 660 MobiDBLite consensus disorder prediction 473 594 - -
Gso6g0806 660 Gene3D - 195 302 - -
Gso6g0806 660 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 13 646 IPR045042 -
Gso6g0806 660 MobiDBLite consensus disorder prediction 505 529 - -
Gso6g0806 660 SUPERFAMILY Sm-like ribonucleoproteins 288 358 IPR010920 -
Gso6g0806 660 Pfam Mechanosensitive ion channel 245 452 IPR006685 GO:0016020|GO:0055085
Gso6g0806 660 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 13 646 - -
Gso6g0806 660 MobiDBLite consensus disorder prediction 556 594 - -
Gso6g0806 660 MobiDBLite consensus disorder prediction 638 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0806 Gso-Chr6 7627540 7634601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0806 18 618 Mechanosensitive Ion Channel Family AT1G58200 52.664 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0806 K22047 - gmx:100797302 1281.16