Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0798 ATGGGTTACCTCTCTTGCAATGCTGAGTCCGCAATCGCCACCTGCGATCCCCACTTCAAGAAACACAAGCCCCTCGCCGCAACACCAATCCGACACTTCCACTACGCCGACATCGCCGCCGCTGCCAACGGCTTCTCCGCCGACACCTTCTTGGGTAGAGGAAGTCACGGCAGGGTCTACAGAGCCACCCTCGACGGCGGCAAGCTCCTCGCCGCCGTCAAAACAACAAAACTCGCCGGCACCACCTCGAAGAACCACGCCTCCAAATGCACCGGTTGCGGCAACTGCACCAGCCCCGCCGAAAACGAGATCGAGATCCTCTCCCAAGTCCCCAGCCCCCGCCTCGTTAACCTCCTCGGCTTCAGCACCGACCCAAACGGCAACAAATTAATCGTCGTCGAATACATGCCCAACGGTTCGCTCCACGATCTGTTACACTCCGTTAAAAAACCGCCCGGTTGGAGCCTTAGGGTCCGGTTCGCGCTTCAGGTCGCCAAAGCGGTTCGCGAATTACACTCTTCCAACCCTCCCGTTATTCACCGTGACGTTAAGTCTTCCAACGTTTTGATCGATGAAGAATGGAACGCGAGGCTCGGTGACTTTGGCCTCGCCTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACTCCCCCCGCGGGGACGTTAGGGTACCTCGACCCCTGCTATCTTGCGCCGGAGGATCTCAGTGCTAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTCTTGGAGATAATCAGCGGAAGAAACGCTATCGATGTTAACTTTAGTCCTCCGTCTGTGGTGGACTGGGCGGTGCCGTTGATTAAGCTCGGCGACTTCGCCGGAATCTGCGACCGGAGAATCGGACCGCAGCCGGACCCCGCCGTGCTGCGGCAGCTCGCGGTGCTGGCTGCCAGATGCGTGAGGTCGACGGCGGAGAAGCGTCCGTCAATGGCGGAGGTGGTGGAGTGCCTTAATCTGGCGAGGAAGAGGAATCGCGCGTCGCCGATTTGGAACAATTTGCGGAGGCGCGTGGCGAGCGTGGAGAGCGCGCTTCCGGTGTGGGAGGAGGAGTGTGATAGTGATAGGAGTGAGAAATTTGAGAGGATGGTGAAGAAAGGTGGGAAAGGGAAAGTATCGAGTGTGTCGCGTGTAGGGTATGGGAATGGGAGTGAGGCCTCCAATAATAATGATAAAGTGATGAGGTCAAAGTCCATTGGTTCTGGTTCTGGTTCGTTGAGAGGGAGTTGGGTTAAAATGCAACAGCAACAGCAACAACACCAAACGGACAACGGCTTTGGAAGAAGGAAGGTGAGGCTAAAAAAGTCAAAGTCCATGGGGGTTTTGCAAGGTTCTCTGCTGTTACATTATGGCATCCAGAATAACAATAATGATGTTCGGGAATGGCCAAGTTGGAAAAGAAAATGCTGGAAAAACCGTTAG 1446 0.5574 MGYLSCNAESAIATCDPHFKKHKPLAATPIRHFHYADIAAAANGFSADTFLGRGSHGRVYRATLDGGKLLAAVKTTKLAGTTSKNHASKCTGCGNCTSPAENEIEILSQVPSPRLVNLLGFSTDPNGNKLIVVEYMPNGSLHDLLHSVKKPPGWSLRVRFALQVAKAVRELHSSNPPVIHRDVKSSNVLIDEEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNFSPPSVVDWAVPLIKLGDFAGICDRRIGPQPDPAVLRQLAVLAARCVRSTAEKRPSMAEVVECLNLARKRNRASPIWNNLRRRVASVESALPVWEEECDSDRSEKFERMVKKGGKGKVSSVSRVGYGNGSEASNNNDKVMRSKSIGSGSGSLRGSWVKMQQQQQQHQTDNGFGRRKVRLKKSKSMGVLQGSLLLHYGIQNNNNDVREWPSWKRKCWKNR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0798 481 Pfam Protein tyrosine and serine/threonine kinase 49 326 IPR001245 GO:0004672|GO:0006468
Gso6g0798 481 MobiDBLite consensus disorder prediction 379 415 - -
Gso6g0798 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Gso6g0798 481 Gene3D Phosphorylase Kinase; domain 1 8 135 - -
Gso6g0798 481 SMART serkin_6 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0798 481 PANTHER OS01G0750732 PROTEIN 1 462 - -
Gso6g0798 481 Gene3D Transferase(Phosphotransferase) domain 1 136 346 - -
Gso6g0798 481 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Gso6g0798 481 PANTHER - 1 462 - -
Gso6g0798 481 MobiDBLite consensus disorder prediction 385 415 - -
Gso6g0798 481 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Gso6g0798 481 ProSiteProfiles Protein kinase domain profile. 45 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0798 Gso-Chr6 7548254 7550231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0798 31 337 Receptor kinase-like Gene Family AT3G59420 40.385 9.50e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso6g0798 PK_Tyr_Ser-Thr 3.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0798 - - gsj:114415240 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0793 4 8182291 8184206 Gso6g0798 6 7548254 7550231 GST
Gso2g1806 2 41867327 41869104 Gso6g0798 6 7548254 7550231 PCT
Gso6g0798 6 7548254 7550231 Gso2g1806 2 41867327 41869104 PCT