Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0785 ATGAAAGGAGAATACCTAGAGCAACAGCAACAACATCCTAAGAGTGAAACAACACCACCTAGTATGTTCTCAAAGCTTCAACCCCAACACCATCCTTTCCCACACCACCCTTTCCAACTCTCCGCGGAAGAAGAAAACCGTGTTGGCGCCGCCACCACCCCAAGCACCGTTCAGAAAGCAAACTCCTCCGGCGGCGACGGCGCGACTATCGAGGTTGTTCGGCGTCCGAGGGGGCGTCCTCCCGGGTCCAAAAACAAACCCAAGCCACCCGTTATCATAACCCGAGACCCGGAACCCGCTATGAGTCCATACATTTTAGAAGTGTCTGGTGGAAACGACGTCGTGGAGGCCATCGCCCAGTTCAGTCGCCGCAAGAACATGGGAATCTGCGTCCTCACCGGTTCCGGAACCGTCGCTAACGTTACGCTCCGTCAACCTTCTACTACTCCCGGCTCAACCGTTACTTTTCACGGCCGTTTCGATATCCTTTCTGTTTCCGCCACCTTCCTTCCGCAGCAGTCGGGCGCTTCGCCGGCGGTTCCCAACGGCTTCGCCATCTCGCTCGCCGGACCGCAGGGGCAGATCGTCGGAGGACTTGTTGCCGGCGGGCTGATGGCCGCCGGCACGGTATTCGTGATCGCCGCCTCGTTTAACAACCCTGCATACCACAGGTTGCCGCCGGAGGAAGAGGGCGCCTCCGCCGGTGATGGACATTCGCCGCAGGTCTCCGGCGGCGGAGATAGCGGACATGGACAGGCGGAGTCGTGCGGAATGTCCATGTACAGCTGTCACTTGCCCTCTGATGTGATTTGGGCTCCAACGGCTAGACCACAACCACCGCCACCACCTTACTGA 855 0.5883 MKGEYLEQQQQHPKSETTPPSMFSKLQPQHHPFPHHPFQLSAEEENRVGAATTPSTVQKANSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAQFSRRKNMGICVLTGSGTVANVTLRQPSTTPGSTVTFHGRFDILSVSATFLPQQSGASPAVPNGFAISLAGPQGQIVGGLVAGGLMAAGTVFVIAASFNNPAYHRLPPEEEGASAGDGHSPQVSGGGDSGHGQAESCGMSMYSCHLPSDVIWAPTARPQPPPPPY* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0785 284 MobiDBLite consensus disorder prediction 10 25 - -
Gso6g0785 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 232 - -
Gso6g0785 284 MobiDBLite consensus disorder prediction 224 253 - -
Gso6g0785 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 219 IPR005175 -
Gso6g0785 284 CDD DUF296 103 217 IPR005175 -
Gso6g0785 284 Gene3D - 102 238 - -
Gso6g0785 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 283 IPR014476 GO:0003680
Gso6g0785 284 MobiDBLite consensus disorder prediction 1 97 - -
Gso6g0785 284 ProSiteProfiles PPC domain profile profile. 98 238 IPR005175 -
Gso6g0785 284 MobiDBLite consensus disorder prediction 46 65 - -
Gso6g0785 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 11 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0785 Gso-Chr6 7400770 7402107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0785 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 58.249 1.51e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0785 - - gmx:100815772 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0779 4 7976852 7978156 Gso6g0785 6 7400770 7402107 GST