Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0776 ATGGAGTTCTATGACCAAGATTTCTTGGAGGAATTAATGACACTAAGAAGAGAAACATGGGACACCAATCCAAGCACAGAAGAAAATCAGTTCTTCTCTAATGCTTGGAGTTTTGACTGTTTTGATCAAAACTCTCTACCTTACCTCCCAAACTCTTCTTGTGGTCAAGAAGTTCCTCAAAGTTACAATAACGACTACCCCTTCAGTGAAATCTATGGCTCCTTACTTGATGAATCCTCACCACAGATTATGGATTCATACTATGGCACCCTTGATATAACTCCACTCAATACCCCTCCATTTCTTGGTCAAGAGGATTATCCATTGTCCATGATGGAAGAAGAGGACCCGGGTTTTCTTGGGGAAGAGCTTAAGAATTTGGAGTTGCAAACCACATGCAAAGTGGAGAAAACACAATCCTCCGAAATGCCGGCTTTCAACATGGGAACGGGTCTGGAAAGAAAGAACAACCGATCAAAGAAGCTTCAGGGGCAACCCTCCAAGAATCTAATGGCGGAGAGGAGAAGAAGAAAGAGATTGAACGACCGGCTCTCAATGCTAAGAGCAATTGTCCCCAAGATTAGTAAGATGGATAGAACATCAATACTTGGAGACACTATTGATTACATGAAAGAACTTCTGGAGAAGATCAACAATCTGCAACAAGTAGAAGTAGATTCAAGCATGGCTGGCATTTTTAAAGATGTAAAGCCAAATGAAATCATAGTGAGAAATTCACCCAAGTTTGAGGTAGAGAGGAGTGTGGACACCCGGGTGGAAATTTGCTGTGCAGGGAAACCAGGGTTGTTACTATCCACAGTAAACACCGTGGAAGCATTAGGCCTAGAGATTCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAGGCTTCTTGCTCAGAGGAATTGGAGCAAAGGGCAATGCTGAGTTCTGAAGATATAAAGCAAGCATTGTTTAGAAGTGCAGGATATGGAGGAAGATGTTTGTGA 996 0.4187 MEFYDQDFLEELMTLRRETWDTNPSTEENQFFSNAWSFDCFDQNSLPYLPNSSCGQEVPQSYNNDYPFSEIYGSLLDESSPQIMDSYYGTLDITPLNTPPFLGQEDYPLSMMEEEDPGFLGEELKNLELQTTCKVEKTQSSEMPAFNMGTGLERKNNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQVEVDSSMAGIFKDVKPNEIIVRNSPKFEVERSVDTRVEICCAGKPGLLLSTVNTVEALGLEIQQCVISCFNDFTMQASCSEELEQRAMLSSEDIKQALFRSAGYGGRCL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0776 331 Gene3D - 172 244 IPR036638 GO:0046983
Gso6g0776 331 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 331 - -
Gso6g0776 331 PANTHER DNA BINDING PROTEIN 3 331 - -
Gso6g0776 331 CDD ACT_UUR-ACR-like 257 298 - -
Gso6g0776 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Gso6g0776 331 Pfam Helix-loop-helix DNA-binding domain 170 213 IPR011598 GO:0046983
Gso6g0776 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 223 IPR036638 GO:0046983
Gso6g0776 331 SMART finulus 170 219 IPR011598 GO:0046983
Gso6g0776 331 MobiDBLite consensus disorder prediction 145 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0776 Gso-Chr6 7292509 7294544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0776 29 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 48.065 1.27e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso6g0776 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0776 - - gmx:100812578 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0769 4 7862740 7864926 Gso6g0776 6 7292509 7294544 GST