Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0774 ATGTCTCCGCCAGTGCTGAGCATAGGGGAGGAGGAGGGTAAAAGCAATGTCACTTTGTTGGTTTCCTCATCAACCACCATGGAAAGTGTGTGTCTCAAGAGCTTAGAATTTAAAGAGCGCAACTACATGGGATTATCTGATTGTTCTTCTGTGGACAGCTCGGTTCCGTCCTTCTCTGAAGAGACTAAAAGTAATCTGAACCTGAAAGCCACTGAACTCAGGCTCGGGCTTCCAGGATCACAGTCTCCTGATAGAGATTCTGATCTTTGCTTAAGAAGCTCAACTCAATTTGATGAAAAAACTTTGTTTCCGTTGCGTCCTTTGACTGATGATCACCATTCTTCAGCCAAGACTGCTGTTTTGGGAAACAAAAGAGGGTTCTCTGATGCCATGAACGGCTTCTCCTCAGAGGGGAAATTCCTAGTTGATTCGGAGGCCGCCAATCCGATACTGTCTCCCAGGCCTGCTTCTAACTTGGGATTAAAACCTGGTTCTACACTTGAGAAGGTTGGAGTTCAGCAAACCAAAATGAAAGAAGTAGCAACAACAAAGGCCAATGAAGCTAGACCCACTATTGATGGTTCTGCAAATAATAATAACAGTGCACCAGCTACCAAGGCTCAGGTTGTGGGATGGCCTCCTATAAGATCATTCCGGAAAAATTCATTGGCTACCACTTCAAAGAACAATGAAGAAGTTGATGGAAAAGTGGGGGTTGGTGCACTGTTTGTCAAGGTCAGTATGGATGGTGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTACATATCCAGAATTATCTTCTGCTCTAGAAAAGATGTTCAGCTGTTTTACTATGAGTAAATGTGGATCTCATGGAATTCTGGGCAGGGAGATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCAGAATATGTTCTTACATATGAGGACAGAGAGGGCGATTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTTATTGAAACATGCAAGAGGCTGAGGATCATGAAGAGTTCTGATGCCATTGGTCTAGCTCCCAGGGCTGTTGAAAAATGTAAGAGCAGAACCTAG 1086 0.4411 MSPPVLSIGEEEGKSNVTLLVSSSTTMESVCLKSLEFKERNYMGLSDCSSVDSSVPSFSEETKSNLNLKATELRLGLPGSQSPDRDSDLCLRSSTQFDEKTLFPLRPLTDDHHSSAKTAVLGNKRGFSDAMNGFSSEGKFLVDSEAANPILSPRPASNLGLKPGSTLEKVGVQQTKMKEVATTKANEARPTIDGSANNNNSAPATKAQVVGWPPIRSFRKNSLATTSKNNEEVDGKVGVGALFVKVSMDGAPYLRKVDLKNYSTYPELSSALEKMFSCFTMSKCGSHGILGREMLNETKLKDLLHGSEYVLTYEDREGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVEKCKSRT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0774 361 MobiDBLite consensus disorder prediction 188 206 - -
Gso6g0774 361 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 355 IPR003311 GO:0005634|GO:0006355
Gso6g0774 361 ProSiteProfiles PB1 domain profile. 241 343 IPR000270 GO:0005515
Gso6g0774 361 MobiDBLite consensus disorder prediction 182 208 - -
Gso6g0774 361 PANTHER AUXIN-INDUCED PROTEIN 23 355 - -
Gso6g0774 361 Gene3D - 236 355 - -
Gso6g0774 361 SUPERFAMILY CAD & PB1 domains 240 342 - -
Gso6g0774 361 Pfam AUX/IAA family 71 352 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0774 Gso-Chr6 7266897 7271576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0774 255 343 B3 DNA Binding Superfamily AT1G19220 35.955 2.25e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Gso6g0774 AUX_IAA 2e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0774 K14484 - gmx:100783314 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0767 4 7830189 7834988 Gso6g0774 6 7266897 7271576 GST