Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0773 ATGGGTACTGGTTGGAGAAGAGCCTTCTGCACCCGCGACCCTGCTTCTACCATATCGGATAAACAGCCCAGAAGCCCGAGCCAAAGCCCGAGCCCGAGCCCAAGAAGCTGCGCCAGATTGGGTTTTCTCTCCGGAGGTAGCAACCCTTCCACCCCACGCTTGCGTTGTACAACAACAGCGGAAACTGTTTCTCAAACAGTTACAGTAAGTGAGAGTCCCAGAGTTCATAGCAAGAATACCACCCCCAGAGCAGCGAAATCACCAAAAACGCTATCGGTCTCAAATCCAACTTCTCCTCGCTCCCCTCTCAAGCTCTCCCTCTTCAGGAACAGCTTCAAATTCAGGAGTAGCTGCGGAATTTGCTTGAACAGCGTGAAGACGGGACAGGGTACGGCGATTTACACAGCGGAATGTGGTCACGCGTTTCATTTCCCGTGCATCGCAGCGCATGTACGCAAGCATGGAAGCCTGGTGTGCCCCGTATGCAACGCCACGTGGAAAGACGTGCCTCTACTTGCGGCGCACAAGAACCTCGCTCCAGAATCCGCCACGCAAAACAACGTCGTCGTCGTCCAGAGGGTCGCAGAAAGTCCTTACACCAATGCTGCCAGCGACAAAAAGCCAACAGAGAATAATAATGCCTCCCCCGTTTTCAAAGCCTACAACAACAACAACCACGTGGAGCCACCGGCAAAGCATTCCGATCCAAGCAGGTCCTACGACGACGATGAACCACTCCTCTCTCCCACCTCCGACGGCCGGATTATTCCCATTCCCGAAGCCGACGAGGACGAGGATGAAGACCCCGGCGAGTTCCAGGGCTTTTTCGTCAATCCAAAGAACTCATCCTCTTCCAAATCCTACTCCGATTCGTTGCAAACCAGCGACGGAGATTCCAGAACAGTTCAGGTGAAACTGATGCCGGAGTGCGCTGTCATCTCAGTTTCACGAGCACACGAGACCTACGCTTTGGTCTTAAAAGTGAAGGCTCCACCGCCGCCACCACCTCCTTCGCGGAGCAGCGCGGCGCCGTCGCAGCGCGCGCCAATAGATCTGGTGACCGTGCTGGACGTAGGTGGAAACATGACCGGCGGGAAGCTTCACATGCTGAAGCGCGCGATGCGTTTGGTTATCTCATCGCTTGGCACCGCTGACAGGCTCTCCATCGTGGCTTTCTCAGCCACCTCCAAACGGCTCTTACCTTTGCGAAGAATGACAAGCCAAGGTCAGCGCGTGGCTCGTCGAATCGTTGACCGGCTAGTGATAGGTCAAGGCTCCAGCGTAGGGGATGCGTTGAGGAAAGCCACCAGAGTGTTGGAAGATCGCAGAGAAAGAAACCCGGTGGCCAGCGTCATGCTCTTATCAGACGGTCAAGAAGAAAAGGTTCAAAATCAGAGAGGTAATAATAATCAGAGGAAGTCATCGAGCCACGTTTCGTCGACGCGGTTCGCGCATATCGAGATTCCGATTCACGCGTTTGGGTTCGGGGCGAAGAGCGGTTACAGTCAGGAACCGGGGGAGGACGCGTTTGCGAAGTGCGTGGGTGGGCTTTTGAGCGTGGTGGTTCAGGATTTGAGGATTCAAGTAGGGTTTGAATCTGAGTCGGTTGAGATAAGTGCGATTTACTCGTGCAGTGGAAGGCCAACACTGATGAGCTCAGGGGCGGTGAGGATGGGGGATTTGTACGCCGAGGAAGAGAGGGAGCTATTGGTTGAGTTGAGAGTTCCAGCATCGTCAGGAACTGGGGCCCACAACCACGTGATGACGGTACGGTGTTTGTATAAAGACCCTGCCACGCAGGAGATCGTATACGGTAGGGAGCAGGGTCTTCTGGTGCCGCCGCCCCAGAGTTCCGGTACAAGGATTGAGAGGCTAAGGAATCTCTTCATAACCGCCCGAGCCATTGCAGAGTCGAGGAGGCTCCTTGAGCATAGCCCTGACTTCACCAGTGCTCATCATTTGCTTGCCTCGGCGCGTGTACTTCTCATGCAGTCTAATTCGGCTTCGGCTCAGGAGTATGTTCGCGGCTTGGAGGCTGAGCTGGCAGAGCTTCACTGGAGGAGACAGCATGAGCAGATGCAGGTCCAGGTACAGCAGCGGAGAAGAGGGGCCGAGAGAGAGGTCATGGCGCTGCTGGACGAGAACGGCGAGCCGCTTACGCCGACTTCGGCTTGGAGAGCCGCGGAGAAGCTGGCTAAGATGGCAATGATGAAGAAGTCTTTGAATAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2268 0.5511 MGTGWRRAFCTRDPASTISDKQPRSPSQSPSPSPRSCARLGFLSGGSNPSTPRLRCTTTAETVSQTVTVSESPRVHSKNTTPRAAKSPKTLSVSNPTSPRSPLKLSLFRNSFKFRSSCGICLNSVKTGQGTAIYTAECGHAFHFPCIAAHVRKHGSLVCPVCNATWKDVPLLAAHKNLAPESATQNNVVVVQRVAESPYTNAASDKKPTENNNASPVFKAYNNNNHVEPPAKHSDPSRSYDDDEPLLSPTSDGRIIPIPEADEDEDEDPGEFQGFFVNPKNSSSSKSYSDSLQTSDGDSRTVQVKLMPECAVISVSRAHETYALVLKVKAPPPPPPPSRSSAAPSQRAPIDLVTVLDVGGNMTGGKLHMLKRAMRLVISSLGTADRLSIVAFSATSKRLLPLRRMTSQGQRVARRIVDRLVIGQGSSVGDALRKATRVLEDRRERNPVASVMLLSDGQEEKVQNQRGNNNQRKSSSHVSSTRFAHIEIPIHAFGFGAKSGYSQEPGEDAFAKCVGGLLSVVVQDLRIQVGFESESVEISAIYSCSGRPTLMSSGAVRMGDLYAEEERELLVELRVPASSGTGAHNHVMTVRCLYKDPATQEIVYGREQGLLVPPPQSSGTRIERLRNLFITARAIAESRRLLEHSPDFTSAHHLLASARVLLMQSNSASAQEYVRGLEAELAELHWRRQHEQMQVQVQQRRRGAEREVMALLDENGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0773 755 MobiDBLite consensus disorder prediction 231 248 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 43 100 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 200 230 - -
Gso6g0773 755 Pfam RING-like zinc finger 118 147 IPR001841 -
Gso6g0773 755 Pfam von Willebrand factor type A domain 351 495 IPR002035 -
Gso6g0773 755 MobiDBLite consensus disorder prediction 15 35 - -
Gso6g0773 755 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 234 IPR013083 -
Gso6g0773 755 SMART VWA_4 349 537 IPR002035 -
Gso6g0773 755 CDD vWA_C3HC4_type 350 522 - -
Gso6g0773 755 ProSiteProfiles VWFA domain profile. 351 496 IPR002035 -
Gso6g0773 755 SUPERFAMILY RING/U-box 112 168 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 457 478 - -
Gso6g0773 755 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 755 - -
Gso6g0773 755 SUPERFAMILY vWA-like 349 525 IPR036465 -
Gso6g0773 755 MobiDBLite consensus disorder prediction 455 478 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 1 100 - -
Gso6g0773 755 CDD RING-H2 118 163 - -
Gso6g0773 755 Coils Coil 687 707 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 276 300 - -
Gso6g0773 755 MobiDBLite consensus disorder prediction 200 300 - -
Gso6g0773 755 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 755 - -
Gso6g0773 755 SMART ring_2 118 162 IPR001841 -
Gso6g0773 755 ProSiteProfiles Zinc finger RING-type profile. 118 163 IPR001841 -
Gso6g0773 755 Gene3D von Willebrand factor, type A domain 351 516 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0773 Gso-Chr6 7242074 7245472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0773 118 168 C3H Transcription Factor Family AT1G74410 41.176 8.58e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0773 - - gmx:100811495 1367.83