Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0738 ATGGATGAGTTTGATAGTGGAGGCCGCAGTGGCGATAAGGCTCCTGGAGCTGAAGACGAAGGCACCACACCTCCCATTCCAGAGAAGGTTCAAGTTGGTGGTTCCCCGTTGTACAGAGTTGAGAGAAAACTTGGGAAGGGAGGATTTGGGCAGGTTTATGTTGGTCGGCGGTTAGGAGCTGTGAATTCTAGTGAACGAACTGGTTCTGGTGCTGTTGAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAGGTTTACAATGCATTAGGCGGTAGTCATGGTGTTCCGCGAGTTCATTACAAGGGACGGCATGGTGACTACTATATTATGGTCATGGATATGCTTGGCCCTAGTCTGTGGGACGTTTGGAATAACAACAATCCTCACATGATGTCTACTGAAATGGTTGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCACGGTGATGTAAAACCTGAGAACTTTTTGCTGGGACCCCCTGGAACTCCTGATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCTACTGGCCTTCATGTTGACTATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTCGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTTCTTCTTCGTGGTCGGCTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAGAAAAAGATGGCCACGTCTCCAGAAACTTTGTGTTGCTTTTGTCCCCAACCATTTCGGCAATTTGTGGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTCGATGGAATTGTGGGCCCAAATCCAGACATCAGGCCAATAAACACTGATGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATAGAAGAAGATGATGATGAACAACCAAATAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAACGCTCGTCGGCCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGCTGGCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACAGCACAAGTTTATGAACTCTCTCCCTTCTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATAAGTGCCATAGCCGGGGCTAATAATGGATCCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACTTGCAGCAATCCTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTTCCGGCTCTAGATGGGCAATTGTTATGTCTCGTGGGGCTGGTTTTTCAGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAATGGTTATCGCATCACCTCAACTGCTGCAACATGGGATCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTAGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTATGGGAGAACAGTGTCATAA 1821 0.4377 MDEFDSGGRSGDKAPGAEDEGTTPPIPEKVQVGGSPLYRVERKLGKGGFGQVYVGRRLGAVNSSERTGSGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRHGDYYIMVMDMLGPSLWDVWNNNNPHMMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLICQVGHKRGRLTIEEDDDEQPNKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPFFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATSGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0738 606 Pfam Protein kinase domain 38 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0738 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gso6g0738 606 SUPERFAMILY Protein kinase-like (PK-like) 38 321 IPR011009 -
Gso6g0738 606 Gene3D Transferase(Phosphotransferase) domain 1 17 356 - -
Gso6g0738 606 PANTHER - 15 580 - -
Gso6g0738 606 MobiDBLite consensus disorder prediction 1 16 - -
Gso6g0738 606 ProSitePatterns Protein kinases ATP-binding region signature. 44 77 IPR017441 GO:0005524
Gso6g0738 606 SMART serkin_6 38 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0738 606 PANTHER CASEIN KINASE-RELATED 15 580 - -
Gso6g0738 606 CDD STKc_CK1 38 315 - -
Gso6g0738 606 ProSiteProfiles Protein kinase domain profile. 38 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0738 606 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0738 Gso-Chr6 6815742 6820391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0738 120 315 MAP Kinase Kinase Kinase AT5G50180 25.628 2.47e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso6g0738 Pkinase 2.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0738 - - gmx:100800125 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0732 4 7266538 7273039 Gso6g0738 6 6815742 6820391 GST
Gso6g0738 6 6815742 6820391 Gso16g0338 16 3837097 3844923 PCT