Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0731 ATGGCCAAAGGATCTTATTCAATGTCTTCAAAGACAAAATCAATGAAATTCATATGCCTCTTCGTGTTCATGCTCAACTTCCACTTATCCCATGGACATCAACAAGAGGTTCAGCTTCTGTTATCCTTCAAAGGTTCTCTCCACGACCCACTTCATTTTCTCTCCAACTGGGTCAGTTTCACTTCCTCTGCCACTATCTGCAAGTGGCACGGCATCACCTGCGACAACAACAACAACGTTAACTCTTCCCACGTTAACGCTGTGGTGATCTCAGGAAAAAACATAACTGGCGAGGTATCCTCTTCCATTTTCCAACTTCCCTACGTCACAAACCTCGACCTTTCCAATAACCAGCTTATTGGGGAAATCACTTTTACCCACTCTCTAAATTCTCTGTCTCCAATCCGTTACCTTAACCTCAGCAACAACAACCTCACTGGCTCCTTGCCTCAACCCTTGTTTTCAGTGCTTTTCTCAAACCTCGAAACTCTGGATCTGTCCAACAACATGTTTTCGGGGAACATACCCGACCAAATTGGATTGCTTTCCAGCCTGAGGTATCTTGATCTCGGAGGAAACGTTTTGGTGGGAAAGATTCCAAATTCCGTCACAAACATGACCACTTTGGAATACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCAGAAGAAATTGGCGTAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGATGAGATTCCAAGTAGCATTGGAGAGTTACTCTCTTTGAATCATCTTGATCTTGTTTACAACAACCTCACTGGACCTATTCCTCACTCTCTCGGACACCTCACCGAGCTTCAGTATCTTTTTCTCTACCAAAACAAACTAAGTGGTCCAATTCCAGGATCCATCTTTGAGCTCAAAAAGCTAATTTCACTTGATCTAAGTGATAACTCTCTTTCGGGTGAGATTTCCGAGCGTGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTTTCAAACAAGTTCACTGGGAACATTCCAAAGGGTGTTGCATCTTTGCCTCGGCTTCAGGTTCTTCAGCTCTGGTCAAACGGATTAACCGGTGAGATTCCTGAGGAGCTAGGGAGGCATAGCAACCTCACTGTGTTGGACCTCTCCACCAACAACCTCTCAGGGAAGATTCCAGATAGCATATGTTATTCTGGTAGTCTTTTCAAGCTTATCCTCTTCTCCAATTCCTTCGAAGGTGAGATTCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGTCGTGTGAGACTCCAAAACAACACATTCTCGGGGAAATTACCATCGGAGTTGTCCACACTGCCTGAGATATACTTCTTGGATATCTCTGGTAACCAACTTTCTGGAAGAATCGATGACAGAAAATGGCACATGCCGTCGCTTCAAATGCTGAGTTTGGCTAACAACAACTTCTCAGGAGAAATCCCAAACACTTTTGGTACTCAAAAACTTGAGGACTTGGACTTATCACATAACCAATTCTCAGGTTCAATTCCACTTGGTTTCAAAAGTTTGTCAGAACTCGTAGAATTGAAGCTCAGAAATAACAAACTCTTCGGTGACATCCCTGAAGAAATTTGCTCGTGCAAGAAGCTTGTGTCGTTAGACTTGAGTCACAACCATCTCAGCGGTGAGATTCCAATGAAACTCTCCGAGATGCCGGTGCTCGGCCTCCTCGACCTGTCGGAAAACCAATTCTCCGGTGAGATTCCGCAAAATTTGGGAAGCGTGGAGTCTCTAGTTCAGGTGAACATATCGCACAACCATTTTCATGGAAGATTACCTTCCACCAGTGCTTTTCTTGCCATCAACGCGAGTGCAGTCACTGGCAACAACCTCTGTGACCGTGACGGTGACGCTTCAAGCGGTTTGCCACCGTGCAAAAACAACAATCAGAACCCAACTTGGCTCTTCATCATGCTGTGTTTTCTACTAGCGTTGGTTGCGTTCGCAGCAGCTTCTTTTCTCGTGTTTTACGTTCGTAGAAGAAAGAACTTCTCGGAGGTGCGAAGAGTGGAAAACGAAGACGGGACGTGGGAAGTGCAATTCTTTGATTCCAAAGCCGCGAAGTTGATCAATGTAGACGATGTTCTGTCGGCTGTTAAAGAAGGAAACGTTATGTCCAAAGGAAGAAACTGGGTTTCGTACCAAGGGAAGTGCATGGAGAATGACATGCAGTTCGTGGTGAAGGAAATCAGCGACTTGAATTCACTTCCAATGAGTATGTGGGAAGAGACAGTAAAGATTGGAAAGGTTCGTCACCCAAATATCGTTAACCTTATTGCGGCGTGTAGGTGTGGGAAGAGAGGGTACTTGGTGTACGAGCACGAGGAGGGGGACGAGTTAAGCGAAATTGCCAACAGTTTGAGTTGGCAACGGCGTTGCAAAATCGCTGTTGGCATCGCAAAGGCGCTTAAGTTCTTGCATTCTCACGTTTCATCCATGGTTTTGGTTGGAGAGGTGTCACCGGAAATAGTTTGGGTCGACGCTAAAGGCGTTCCTCGCCTCAAGGTCACCCCTCCCATGATGCCATGTTTGGATGCCAAGAGTTTCGTTTCTTCGCCCTACGTTGCTCAAGAGAAGAAAAATGTGACGGAGAAGAGTGAGATATATGGATTCGGAGTGGTGCTGATTGAATTATTGACGGGAAGGAGCGCAATGGACATAGAAGCTGGCAATGGCATGCATAAAACCATTGTGGAGTGGGCCCGCTATTGCTACTCCGATTGTCATCTTGATGTGTGGATAGATCCTGTGCTGAAGGGTGTAGATGCATTGAGCTATCAGAACGACATCGTTGAGATGATGAATCTTGCGCTGCATTGTACCGCCACTGATCCCACCGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGACTATTCACAGAACCACTTTTTGTTGA 2946 0.4576 MAKGSYSMSSKTKSMKFICLFVFMLNFHLSHGHQQEVQLLLSFKGSLHDPLHFLSNWVSFTSSATICKWHGITCDNNNNVNSSHVNAVVISGKNITGEVSSSIFQLPYVTNLDLSNNQLIGEITFTHSLNSLSPIRYLNLSNNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIGLLSSLRYLDLGGNVLVGKIPNSVTNMTTLEYLTLASNQLVDKIPEEIGVMKSLKWIYLGYNNLSDEIPSSIGELLSLNHLDLVYNNLTGPIPHSLGHLTELQYLFLYQNKLSGPIPGSIFELKKLISLDLSDNSLSGEISERVVQLQRLEILHLFSNKFTGNIPKGVASLPRLQVLQLWSNGLTGEIPEELGRHSNLTVLDLSTNNLSGKIPDSICYSGSLFKLILFSNSFEGEIPKSLTSCRSLRRVRLQNNTFSGKLPSELSTLPEIYFLDISGNQLSGRIDDRKWHMPSLQMLSLANNNFSGEIPNTFGTQKLEDLDLSHNQFSGSIPLGFKSLSELVELKLRNNKLFGDIPEEICSCKKLVSLDLSHNHLSGEIPMKLSEMPVLGLLDLSENQFSGEIPQNLGSVESLVQVNISHNHFHGRLPSTSAFLAINASAVTGNNLCDRDGDASSGLPPCKNNNQNPTWLFIMLCFLLALVAFAAASFLVFYVRRRKNFSEVRRVENEDGTWEVQFFDSKAAKLINVDDVLSAVKEGNVMSKGRNWVSYQGKCMENDMQFVVKEISDLNSLPMSMWEETVKIGKVRHPNIVNLIAACRCGKRGYLVYEHEEGDELSEIANSLSWQRRCKIAVGIAKALKFLHSHVSSMVLVGEVSPEIVWVDAKGVPRLKVTPPMMPCLDAKSFVSSPYVAQEKKNVTEKSEIYGFGVVLIELLTGRSAMDIEAGNGMHKTIVEWARYCYSDCHLDVWIDPVLKGVDALSYQNDIVEMMNLALHCTATDPTARPCARDVLKALETIHRTTFC* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0731 981 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 979 - -
Gso6g0731 981 SUPERFAMILY Protein kinase-like (PK-like) 710 973 IPR011009 -
Gso6g0731 981 SUPERFAMILY L domain-like 350 607 - -
Gso6g0731 981 Gene3D Ribonuclease Inhibitor 324 634 IPR032675 -
Gso6g0731 981 Gene3D Ribonuclease Inhibitor 255 323 IPR032675 -
Gso6g0731 981 Gene3D Ribonuclease Inhibitor 35 155 IPR032675 -
Gso6g0731 981 SMART LRR_typ_2 517 541 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 158 182 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 565 589 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 375 398 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 230 254 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 278 302 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 470 493 IPR003591 -
Gso6g0731 981 SMART LRR_typ_2 350 374 IPR003591 -
Gso6g0731 981 Gene3D Phosphorylase Kinase; domain 1 677 788 - -
Gso6g0731 981 ProSiteProfiles Leucine-rich repeat profile. 376 398 IPR001611 GO:0005515
Gso6g0731 981 Gene3D Transferase(Phosphotransferase) domain 1 791 979 - -
Gso6g0731 981 SUPERFAMILY L domain-like 63 388 - -
Gso6g0731 981 Pfam Protein kinase domain 726 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0731 981 PANTHER - 12 979 - -
Gso6g0731 981 Gene3D Ribonuclease Inhibitor 156 251 IPR032675 -
Gso6g0731 981 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Gso6g0731 981 ProSiteProfiles Leucine-rich repeat profile. 160 182 IPR001611 GO:0005515
Gso6g0731 981 ProSiteProfiles Protein kinase domain profile. 667 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0731 981 Pfam Leucine rich repeat 351 410 IPR001611 GO:0005515
Gso6g0731 981 Pfam Leucine rich repeat 159 219 IPR001611 GO:0005515
Gso6g0731 981 Pfam Leucine rich repeat 495 554 IPR001611 GO:0005515
Gso6g0731 981 Pfam Leucine rich repeat 232 291 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0731 Gso-Chr6 6768363 6772642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0731 20 973 Receptor kinase-like Gene Family AT2G25790 52.129 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Gso6g0731 Pkinase 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0731 - - gmx:100777118 1909.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0726 4 7191428 7195732 Gso6g0731 6 6768363 6772642 GST