Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0690 ATGGAAGGTGACCAGACAATCCCTGCTGCATCAGATGTGGTGATAGAAGGTGTTCAGAAAATTAGAGCTCTTAATGGGAGGACTACTGGCCCTACAAGGCGCTCTACCAAAGGACAATGGACACCTGAAGAGGACGAGATTTTGCGGAAGGCTGTTCAGCGTTTCAAAGGAAAGAACTGGAAAAAAATAGCTGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTAAATCCAGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAGGATGAAATAATTATTGATTTGGTGAATAGATATGGACCTAAAAAGTGGTCTACTATCGCACAACACTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGCGCACATCAGATTTATGGGAACAGATGGGCAGAATTAGCGAAGTTATTGCCTGGAAGGACAGACAATTCTATAAAAAACCATTGGAATAGTTCTGTAAAAAAAAAATTGGATTCTTACTTGGCATCAGGCCTGCTTACTCAGTTACAAAATGTACCACTTGTTGGAAATCCGAATCAACCTATTGCTTCCATCTCTTCGAGGTTGCAGCAGAGTGGAGATGATAATGGTCCCAGGGGAACTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCTGGTCACTTTTCATCAGCCAGAGATATGAGCAGTGTTGTTTTACAAACAGGAGAGGAATACAGACCAAGTGAAGAACCTAGTCAAGCATCCTGTTCAGAGCCATATTATGTGTCTCTGGATGAAGTAACTGCATCCCTTCAAGACATGGCTGGCCAAGAGATTTGCACTTCTCAATTCATTGAACAGAAATATTCACACAAACCTAGAAATTCCTCAAACGGGGACTGCCAGCTTGATTTACTTGACTTGACCAATATTTCCTCACTGGACTTTGGGCAGGAATCATCACAGATGCAAAATGATTGCGTAGCTCCTAGTGAAAATCACAACATTGTGAATGTTCCGTTTCAGACTTCGATGGGGTTAGGTGTTGCAACGACCATGGGACCTACATCTGTTAAACCAGAACACATGTTGATGTCTGATGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGTGATGAATGCTTTTCTTCTGGAGATTACAGTAAAGGTGTAAACATGGTTAACTTGTCAGGATGTACCTCATTTCTTTGTCAGTCATCATTACCATCTGTCCCATCAGTAGTTTCTTCTGCTGGTGATAGGTTGACGTATACATATACAGCCGAAGCCAATCAGTTGGTTGGGTCTGAGGATCAGCAGTTTGTCTCCAGAACACAGGACAACATAATTTATGCTAATGACTTGTCCAGTTCTCCTTGTATCCATAGGATAGACAGCACAGAAATGCAAGAGCCATCAGATGTTGTGAAAGGTGATTCAAAATTGGTCCCTGTAAATAGTTTTGGCTGTGGATCAGACGCTAAGCAAACTTCCTATCCAACGGATGAAAAGCCAAATATGCTTACAGAACAGGAGGACAAAGGTGCCCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGGGGTGATATGCAGCAGGAATTCAGTCCCCTAGGTATCCGCCAATTTATGATGTCTTCTATGAATATGGACCTAACTCCTTTTAGATTATGGGACTCACCTTCTCGTGATGATAGTCCTGATGCTTTGTTAAAAAGTGCGGCTAAAACCTTCACAGGTACACCATCTATATTAAAGAAACGAAACCGAGACCTTTTATCTCCACTATCAGATAAAAGAATTGACAAGAGACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGATGACAATGAGACTCAGGGAGCAGATTTGCTTCCTGCATCTTCAATGCAAAAGAGGGACTCTGGTACCTCTGTTGAAGGTGATAAACAGAATTGTGGACAAGCTGTTAAAGTGGAACAAGTAGAGGATAAAAACAAGTCTGCAATTTTGAACGACAAAAAATCAGAAGACGATTCGGGTGATAACAATTCTCTGGATAAAATTAAGCAGCAACCTCTTGATGTTGATTCTGAGATAAAGAATGATGCTAGTGCTGCTGCTGAAATTGTGCAACAACCATCTGGAATTTTGGTTGAACATGATAGGAATGATCTGTTACTGTATTCACCTGATCAGGTTAATTTGAAATCAGAAAAAAAAATTAGTTTAAGCGCTAGAACTAAAAAAAATCCATGCTCAAGGATTAACTCACCATCTGCTTGGGTAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAGTCTATCAGTTCATCAGGCCCGGGGGAGAATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAATCTCCTTGGTTCATGAACACTTTTTTGTCCAGCCCCAGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTCATGAGCCCTGGTGACAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAGTGAACAAACTGCGGCTCAATATGCCAGCGCTCAAGAGATTCTGGGAAATGAGACTCCTAAGGCATTACCAAAAGATGCTTCCAGAAACGACAGGGATGAAGATCAGGAACATATCGATGCTCATAATCAGCATGGGAACCATTGTCAGTTGGCTTCAAGTGCTCTGGTGGAGCGACGTGTACTTGACTTCAGCGAATGTGGAACTCCGGTCCGAGGTGATAGCAGCAAATCCTCAGCTAAGAACTTTTCAAGCCCTTCTTCGTATTTGTTGAAGGGCTGTAGATAG 3000 0.416 MEGDQTIPAASDVVIEGVQKIRALNGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNRWAELAKLLPGRTDNSIKNHWNSSVKKKLDSYLASGLLTQLQNVPLVGNPNQPIASISSRLQQSGDDNGPRGTEGEEVSQCSQESANAGHFSSARDMSSVVLQTGEEYRPSEEPSQASCSEPYYVSLDEVTASLQDMAGQEICTSQFIEQKYSHKPRNSSNGDCQLDLLDLTNISSLDFGQESSQMQNDCVAPSENHNIVNVPFQTSMGLGVATTMGPTSVKPEHMLMSDDECCRILFSEAISDECFSSGDYSKGVNMVNLSGCTSFLCQSSLPSVPSVVSSAGDRLTYTYTAEANQLVGSEDQQFVSRTQDNIIYANDLSSSPCIHRIDSTEMQEPSDVVKGDSKLVPVNSFGCGSDAKQTSYPTDEKPNMLTEQEDKGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNMDLTPFRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRNRDLLSPLSDKRIDKRLEIEMTSTLIKNFSRLDVMFDDNETQGADLLPASSMQKRDSGTSVEGDKQNCGQAVKVEQVEDKNKSAILNDKKSEDDSGDNNSLDKIKQQPLDVDSEIKNDASAAAEIVQQPSGILVEHDRNDLLLYSPDQVNLKSEKKISLSARTKKNPCSRINSPSAWVKEHERLSVAVTCVQSISSSGPGENSGDHIGNDGGLETCNIFGGTPFRKSIESPSAWKSPWFMNTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQISEQTAAQYASAQEILGNETPKALPKDASRNDRDEDQEHIDAHNQHGNHCQLASSALVERRVLDFSECGTPVRGDSSKSSAKNFSSPSSYLLKGCR* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0690 999 MobiDBLite consensus disorder prediction 973 999 - -
Gso6g0690 999 SMART sant 36 85 IPR001005 -
Gso6g0690 999 SMART sant 140 188 IPR001005 -
Gso6g0690 999 SMART sant 88 137 IPR001005 -
Gso6g0690 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Gso6g0690 999 MobiDBLite consensus disorder prediction 669 735 - -
Gso6g0690 999 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Gso6g0690 999 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Gso6g0690 999 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Gso6g0690 999 CDD SANT 143 183 IPR001005 -
Gso6g0690 999 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Gso6g0690 999 MobiDBLite consensus disorder prediction 701 726 - -
Gso6g0690 999 PANTHER TRANSCRIPTION REPRESSOR MYB5 5 998 - -
Gso6g0690 999 MobiDBLite consensus disorder prediction 975 993 - -
Gso6g0690 999 Gene3D - 142 202 - -
Gso6g0690 999 Gene3D - 89 140 - -
Gso6g0690 999 Gene3D - 36 88 - -
Gso6g0690 999 MobiDBLite consensus disorder prediction 670 692 - -
Gso6g0690 999 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Gso6g0690 999 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Gso6g0690 999 CDD SANT 40 83 IPR001005 -
Gso6g0690 999 PANTHER MYB PROTEIN-RELATED 5 998 - -
Gso6g0690 999 MobiDBLite consensus disorder prediction 221 256 - -
Gso6g0690 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Gso6g0690 999 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Gso6g0690 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Gso6g0690 999 CDD SANT 91 135 IPR001005 -
Gso6g0690 999 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Gso6g0690 999 MobiDBLite consensus disorder prediction 919 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0690 Gso-Chr6 6378233 6384933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0690 10 999 MYB Transcription Factor Family AT4G32730 44.583 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso6g0690 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0690 - K09420 gmx:100811335 2009.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0689 4 6731564 6738292 Gso6g0690 6 6378233 6384933 GST
Gso14g1131 14 24206486 24216051 Gso6g0690 6 6378233 6384933 PCT
Gso6g0690 6 6378233 6384933 Gso14g1131 14 24206486 24216051 PCT