Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0669 ATGGCGATGACGACAACGACGGAGTCCGATCTCGATTACGAGCTTCGCTATCTCAGTCTCGCCGTAACCGATACCTTCACTGCTTTCCAAAACCTCTTACCGGATGCGATGACTTCCTTTTCAGCTTGTGGACTAATAGACCCTCTTTGTTCTCAAAACCTCACTCCCAAGCATTCCACCATCACTGCAACCATTGATTCTCAGTCATCGATTTGCGCCACTAGTAATGTTGGGAGCCCAGTCTCAGCTAATAAACCAGAGGGCAGAGAGAATCATACGAAAGGAGCCACAAGTGGTTCCTCTGAGCCATCTGATGAGGATGATGAAGCAGGTGCTTGTGAACAGAGCACAAATCCAGCTGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGACTCTGCCAGAAGGTCAAGAAGAAGAAAACAAGCGCAATTGTCTGACCTTGAGTTGCAGGTTGAAAAACTGAAAGTGGAAAATGCAACCCTATACAAGCAGTTCACGGATGCTAGCCAACATTTTCGTGAGGCAGATACGAATAACCGAGTGCTGAAATCAGATGTAGAAGCTTTGAGAGCCAAGGTGAAGTTAGCAGAGGATATGGTGACTAGGAGCTCTTTTACTACGTTAAACAATCAGCTTCTTCAGACACAACATCATCAAATGAGCACACCCCAGCAACTGAACACGACTAATCTGCGGCGCATGGCGCATGTTTCGCCAACAATCACCGTTCATGGAAATGATGTCTCGTACAATAATGGTGGACAGAATTCAGCACTTGGAAACTTGGATATGAGTTTCAATGACATCAATGAAGTCATGAACGATGCTATGAGTTGTGGAACTATTTGGCCACTCGACTAG 867 0.4579 MAMTTTTESDLDYELRYLSLAVTDTFTAFQNLLPDAMTSFSACGLIDPLCSQNLTPKHSTITATIDSQSSICATSNVGSPVSANKPEGRENHTKGATSGSSEPSDEDDEAGACEQSTNPADMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNNQLLQTQHHQMSTPQQLNTTNLRRMAHVSPTITVHGNDVSYNNGGQNSALGNLDMSFNDINEVMNDAMSCGTIWPLD* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0669 288 Coils Coil 132 166 - -
Gso6g0669 288 Gene3D - 122 178 - -
Gso6g0669 288 Pfam bZIP transcription factor 122 167 IPR004827 GO:0003700|GO:0006355
Gso6g0669 288 PANTHER BZIP TRANSCRIPTION FACTOR 1 287 - -
Gso6g0669 288 MobiDBLite consensus disorder prediction 75 144 - -
Gso6g0669 288 SUPERFAMILY Leucine zipper domain 123 172 IPR046347 GO:0003700|GO:0006355
Gso6g0669 288 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 141 IPR004827 GO:0003700|GO:0006355
Gso6g0669 288 Coils Coil 181 201 - -
Gso6g0669 288 PANTHER BASIC LEUCINE ZIPPER 63 1 287 - -
Gso6g0669 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 121 184 IPR004827 GO:0003700|GO:0006355
Gso6g0669 288 SMART brlzneu 119 183 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0669 Gso-Chr6 6175790 6180810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0669 35 286 bZIP Transcription Factor Family AT5G24800 46.923 3.73e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso6g0669 bZIP_1 1.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0669 K25784 - gmx:778131 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0668 4 6514825 6520721 Gso6g0669 6 6175790 6180810 GST
Gso6g0669 6 6175790 6180810 Gso14g1099 14 21890124 21896915 PCT