Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0666 ATGGATTCTCCAAAGAAACCTAACAAGATCAGAGATATTGTGAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAACTCTTCAAAAACAAGCAGAAGTAACAACAGTAACAACAACACCAGCAGCAGAAGCATCAACTTTCTGAAAAGAACACTTTCCATATCTGAACGTGAAGGAGGAGGATCAAGCAGCAACGTTGTTCCCAAGGGCTATGTAGCTGTTTGTGTTGGAGTGGACCTTAACAGGTTCGTTATACCAACCGAATATTTGGGCCACCAAGCCTTTCTCATGTTACTCAGAGAGGCTGAGGAAGAATTTGGGTTTGAACAAACTGGGGTTCTGAGAATTCCTTGTGAAGTGTCAGTGTTCGAGAGTATCTTGAAGATAGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGATTAAGCCTTGAGAAGATGATGGGATACTGTTCCTCAAACAACCTTGCTTATTCTCACCAACCTCAAAGTCCAATGTGCAGATAG 516 0.4225 MDSPKKPNKIRDIVRLQQILKKWRRVANSSKTSRSNNSNNNTSSRSINFLKRTLSISEREGGGSSSNVVPKGYVAVCVGVDLNRFVIPTEYLGHQAFLMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDKFFTQKCRLSLEKMMGYCSSNNLAYSHQPQSPMCR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0666 171 Pfam Auxin responsive protein 22 131 IPR003676 GO:0009733
Gso6g0666 171 MobiDBLite consensus disorder prediction 25 44 - -
Gso6g0666 171 PANTHER OSJNBA0060N03.10 PROTEIN 6 171 - -
Gso6g0666 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 171 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0666 Gso-Chr6 6143682 6144686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0666 5 171 Calmodulin-binding Proteins AT4G31320 51.295 8.29e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0666 K14488 - gmx:100500385 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0665 4 6483169 6484156 Gso6g0666 6 6143682 6144686 GST
Gso6g0666 6 6143682 6144686 Gso14g1097 14 21247311 21248100 PCT
Gso6g0666 6 6143682 6144686 Gso17g1606 17 26106886 26107772 PCT