Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0656 ATGTGGTTGCCAAAGCATCACTCAGAGAAGAAGGATGGTGTGAATGGATTAGTCGCAGTGGCAATTGATAAAGAAAAAGGGAGTCAAAATGCACTAAAATGGGCAGTTGACAATCTCCTCACAAAAAGTGCAACTGTAATTCTCATCCATGTCAAGCTTCTTGCACCTATTCTATCTCCATCACCTTCTCTTTTTACCCCAAGTAATGCTCTCCTTGGTGATGATACTTCACTGGTATCTAAAGAACCCGAAGGCAATAACAAAAACGTTTTCCTCCCATATCGTGTCTTCTGTACACGGAAAGATATACAATGCACGGACGTTCTACTAGAAGATTCAGATATATCAAAAGCACTAATTGAATATGCTTCCCAGGCGGGAATTGAGCATCTGGTTCTTGGCTCTTCAACAAAAACTAGCTTGCTCAAATTCAAGGTATCAGATACTCCAGGAGCAGTTTCAAAAGGGGCACCAGATTTCTGTACAGTCTATGTTATTGCAAAAGGAAAGATTCAAACAATGCGATCTGCTTCTCGTCCTGCACCGGCCATTGTCCCTAACCTGCTCAGTCAAGCTAGTGTCAGGAAAGATTCAGACCCAAATGTTCTATTAGCTCAAAGCATAAAAGAACAAGAAACACGTCATTCCTTTGATGCTGCACTACCGCGTAGATCGCAGGATGAATCAGAAACATTCAGGTCACCATTCACTAGGAAAGGTTACAGTGGAAGACAATATGGGAACACTCCCAAGCCAGATATGGACATATCTTTTCCAAGTACCGGAAGGAAAAGCATAGAAAACTTTTTCCCTTCATTGAACTCAGATACAGGAATGTCCAACCCTCGACTATCATTGGGCTCAGACATAGATGGAAGCTTCAGCTTTGAGTCAATGCATCATGGAAGGAAGTCTATGGAAACTGGCACTCCTCCTGAATTCTCATCCCTCTCATTTGAGAGTGACAGGCATTCATCTTCTACATCACAAGCCGTGGATGACATGGAGGCTGAAATGAGGAGATTGAAGTTGGAACTGAAGCAAACCATGGAATTGTATAACACTGCCTGTAAAGAAGCATTCACAGCACAGCAGAAGGCAGTGGAACTTAAGAAGTGGAAACTAGAGGAAGAGAGGAGACTGGAAGAGGCAAGGCTTGCTGAGGAAACAGCACTGGCAGTTGCCGAAAAGGAGAGAGCAAAGTCTAAAGCAGCCATTGAGGCTGCTGAAGCTCAAAAGAGGATTGCACAACTGGAAGCACAGAAGAGACTCACTGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAAAAAAAAGTGCTTGATGCTTTAGTAAATGTAGATATCAGGTATAGAAGGTACACAATCGAGGAGATTGAAGCTGCAACAGATTTTTTTGCAGAATCCCTGAAAATTGGAGAAGGGGGATATGGTCCAGTTTTTAAGTGCCTTTTGGATCACACACCTGTTGCAGTCAAGGTTCTACGCCCTGATGCACAACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCGTGTCCAGAATACGGGTGTCTAGTGTATGAGTACATGGCAAATGGAAGCTTGGACGATTGCCTCTTTCGACAAGGCAGCACTCCCCCACTTCCTTGGCAGCTAAGGTTCAAAATAGCAGCTGAGATAGGGACAGGCTTGCTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGAGACTTGAAACCAGGCAACATCTTGCTAAACAGAAACTACGTGGCCAAAATCAGCGACGTAGGTTTGGCGAGGCTAGTTCCACCGTCTGTGGCGGACAGTGTCACGCAATATCACATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGTATGCTAGGGGTGAAGTCAGACATATACTCCCTTGGGATAATTTTTTTGCAAATTTTGACAGCAAAATCACCAATGGGTTTGACACATCATGTTGAAAGGGCCATAGAGAAAGGCACTTTTGCTGAGATGTTGGATCCATCAGTGGTTGATTGGCCAATGGAGGATGCCATGAAGCTTGCTAAGATGGGACTGCAGTGTGCCGAATTAAGGCGCAAAGACAGACCTGATCTTGGCAAGGTTATCCTACCAGAACTCAACAGGCTAAGAGACCTTGCTGAAGATAATAATCTCATTTCAGTTTTGGATAACTCTATGGATGCCCCTCTTGCGAAACAAGTTTCTGTGCATTTGGATGGAGGGGGTCCATCATTTACTCAGTCGAGGGAAATTAGAGCAAACAATTCAGTCAGTTTCTGA 2349 0.444 MWLPKHHSEKKDGVNGLVAVAIDKEKGSQNALKWAVDNLLTKSATVILIHVKLLAPILSPSPSLFTPSNALLGDDTSLVSKEPEGNNKNVFLPYRVFCTRKDIQCTDVLLEDSDISKALIEYASQAGIEHLVLGSSTKTSLLKFKVSDTPGAVSKGAPDFCTVYVIAKGKIQTMRSASRPAPAIVPNLLSQASVRKDSDPNVLLAQSIKEQETRHSFDAALPRRSQDESETFRSPFTRKGYSGRQYGNTPKPDMDISFPSTGRKSIENFFPSLNSDTGMSNPRLSLGSDIDGSFSFESMHHGRKSMETGTPPEFSSLSFESDRHSSSTSQAVDDMEAEMRRLKLELKQTMELYNTACKEAFTAQQKAVELKKWKLEEERRLEEARLAEETALAVAEKERAKSKAAIEAAEAQKRIAQLEAQKRLTAEMKALRESEEKKKVLDALVNVDIRYRRYTIEEIEAATDFFAESLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRQGSTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLNRNYVAKISDVGLARLVPPSVADSVTQYHMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVERAIEKGTFAEMLDPSVVDWPMEDAMKLAKMGLQCAELRRKDRPDLGKVILPELNRLRDLAEDNNLISVLDNSMDAPLAKQVSVHLDGGGPSFTQSREIRANNSVSF* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0656 782 MobiDBLite consensus disorder prediction 222 253 - -
Gso6g0656 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 166 - -
Gso6g0656 782 MobiDBLite consensus disorder prediction 309 332 - -
Gso6g0656 782 Gene3D HUPs 17 166 IPR014729 -
Gso6g0656 782 CDD STK_N 17 169 - -
Gso6g0656 782 Gene3D Transferase(Phosphotransferase) domain 1 539 749 - -
Gso6g0656 782 Coils Coil 392 428 - -
Gso6g0656 782 SMART serkin_6 466 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0656 782 Pfam Protein kinase domain 469 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0656 782 SUPERFAMILY Protein kinase-like (PK-like) 449 724 IPR011009 -
Gso6g0656 782 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 781 - -
Gso6g0656 782 Gene3D Phosphorylase Kinase; domain 1 445 538 - -
Gso6g0656 782 PANTHER OS02G0152300 PROTEIN 5 781 - -
Gso6g0656 782 Pfam Universal stress protein family 18 158 IPR006016 -
Gso6g0656 782 MobiDBLite consensus disorder prediction 301 332 - -
Gso6g0656 782 Coils Coil 325 352 - -
Gso6g0656 782 ProSiteProfiles Protein kinase domain profile. 466 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g0656 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0656 Gso-Chr6 6088775 6093820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0656 1 759 Receptor kinase-like Gene Family AT1G78940 54.981 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso6g0656 Pkinase 5.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0656 - - gmx:100803867 1459.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0654 4 6414865 6420790 Gso6g0656 6 6088775 6093820 GST