Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0652 ATGGAGCTAAAAAATGAGAAGCTAGTCAGGTTCGCCAATGATGAAAAACACACTCTTGAACCTCTTTGGGAAAAGATAGATGCTCACAAACACCATGAGAAGGCATTCCATGTCTACCCAGAATTCAAAATTAGTAATGGTGAAAAGAACAGAATGAGTATCAAAATTCCCTCGCTTGAAAAGTTGAAGGTTTTCCCAGAGAAACACGAGCCATGGAAGAAGAGAATTCTTGATCCTGGCAGTGATGTCATTTTGGAGTGGAACCGGGCTTTCCTGTTTGCTTGCATTCTAGCACTTTTTGTTGATCCACTCTTTTTCTACCTCCCCTCAGTAGCAAATGATGGCAAGTCATTGTGTATGGCCACTGATTTGAATTTAGGAATTGTTGTGACGTGTTTCCGGACATTTGCTGATGTTTTCTATCTACTCAACATGGCCATCAAGTTCAGAACTGCCTATGTGTCTCCAAGTTCAAGGGTTTTTGGCAGGGGAGAGCTTGTTATGGATCCTAGGCTGATTGCAAGGCGGTATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACATTGCCTCTTCCCCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCCCATGCTGATCATACCAACAATGCACTTGTACTGATTGTTCTGCTTCAATATGTCCCCAGATTGTATATGATTTTCCCATTAAGCTCTCAGATTATTAAAACCACCGGTGTGGTTACAAAGACAGCTTGGGCTGGAGCTGCTTACAATCTTCTACTTTACATGTTAGCTAGTCATGTTTTGGGTGCATCCTGGTACTTGTTATCAATTGAAAGGCATGCTACTTGCTGGAAATCCGAATGCAGAAATGAAAGCCTCCCTGTGAAATGTGCTCTTAAGTACTTAGATTGCAGTACTTTAAACCACGATGATCGCATGAAGTGGGTAAACACTACTTCTGTGTTTGGTAACTGCAATCCCGAAAGTAGCACCAGTTTCAACTATGGAATTTTTGGAAATGCAGTGGAAAATAATGTTGTCTCCTCTGCATTTGTAGAGAAGTATCTCTATTGTCTGTGGTGGGGCTTGCAGAACTTAAGTTCCTATGGCCAGAGTTTGACTACAAGCACATTCGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGTCTGGTTCTGTTTGCCCACTTAATTGGTAACATGCAGACCTATTTGCAATCCATTACTGTGAGGCTTGAAGAGTGGAGGCTCAAGCGACGTGACACTGAAGAGTGGATGAGCCATCGCCAGCTCCCACAAAATCTCAGAGAGCGTGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACTCGCGGGGTTGATGAAGAAACAATCCTGCGTGGCCTTCCTACTGACCTACGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAGCTACTTGATGCAATATGTGAGAGATTGGTATCATCATTGAGTACTCAAGGCACGAACATAGTTAGAGAAGGAGACCCGGTTACAGAGATGCTTTTCATCATCAGAGGGAGACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGTTTCTTCAACTCCATTACTTTGAGGCCTGGTGATTTCTGTGGAGAAGAGTTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTTAACTTGCCTTCTTCTACAAGAACTGTTAAGGCCCTTGTGGAAGTGGAAGCCTTTGCACTAAGAGCAGAAGATCTTAAATTTGTGGCCAACCAGTTCCGACGTCTCCACAGCAAGAAGTTGCAGCACACTTTCCGTTTCTACTCTCACCATTGGAGGACATGGGCAGCGTGCTTCATTCAGGCTGCGTGGCGCCGGTTCAAGAAGAGAATGCTGACAAAGAGCCTTAGCTTGAGGGAATGCCAGTCCTTCAATCACGACGAACAAGTCGGGGATGAAATGGAACATGGGGAAGAAGAGCACAGTGCAGTGACTTCAAACACTGCACAAGTGAAACAGAACCTAGGTGTCACTATACTTGCTTCAAGATTTGCTGCAAACACAAGGAGAGGGGTTCAGAAGATTAAGGATGTAGAGTTGCCCAAGTTTCAAAAGCCTGAAGAGCCAGACTTTTCAGTAGAGCCTGATGATGGATAA 2181 0.4392 MELKNEKLVRFANDEKHTLEPLWEKIDAHKHHEKAFHVYPEFKISNGEKNRMSIKIPSLEKLKVFPEKHEPWKKRILDPGSDVILEWNRAFLFACILALFVDPLFFYLPSVANDGKSLCMATDLNLGIVVTCFRTFADVFYLLNMAIKFRTAYVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYMIFPLSSQIIKTTGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNESLPVKCALKYLDCSTLNHDDRMKWVNTTSVFGNCNPESSTSFNYGIFGNAVENNVVSSAFVEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMSHRQLPQNLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTNIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRFKKRMLTKSLSLRECQSFNHDEQVGDEMEHGEEEHSAVTSNTAQVKQNLGVTILASRFAANTRRGVQKIKDVELPKFQKPEEPDFSVEPDDG* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0652 726 MobiDBLite consensus disorder prediction 703 719 - -
Gso6g0652 726 Gene3D - 92 411 - -
Gso6g0652 726 Pfam Ion transport protein 87 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso6g0652 726 MobiDBLite consensus disorder prediction 703 726 - -
Gso6g0652 726 Gene3D Helix hairpin bin 413 476 - -
Gso6g0652 726 Pfam Cyclic nucleotide-binding domain 508 596 IPR000595 -
Gso6g0652 726 SMART cnmp_10 485 616 IPR000595 -
Gso6g0652 726 Gene3D Jelly Rolls 483 603 IPR014710 -
Gso6g0652 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 44 722 - -
Gso6g0652 726 ProSiteProfiles cAMP/cGMP binding motif profile. 485 568 IPR000595 -
Gso6g0652 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 44 722 - -
Gso6g0652 726 SUPERFAMILY Voltage-gated potassium channels 81 407 - -
Gso6g0652 726 SUPERFAMILY cAMP-binding domain-like 415 607 IPR018490 -
Gso6g0652 726 CDD CAP_ED 485 616 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0652 Gso-Chr6 6053182 6059079 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0652 10 722 Ion Channels AT2G24610 70.539 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0652 K05391 - gmx:100803334 1474.14