Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g0651 | ATGACAGTGGAGCTTATGGGGTTCCCCAAAATGGAGGAACAGAAGGCAATTCAAGAAGCTGCCTCCGAAGGCCTCAAGGCCATGGAACACCTCCTCCGTCTCCTATCCTATCAACCCTCTCACCTCCACGCTCACCACACCGACGCCACCGTTTCCAACTTCAAAAAACTCATCTCCTTACTCAGCCGCCGCACCGGCCACGCCCGTTTCCGTCGCGCACCTCTCCCTTCCCCGCCACCGGCTAACCCGGTCACCCTCCACCAACCTCCCTCCACCTTCGTCCCTTCGCACTCCCAGTCTCTAACCCTCGATTTCACAAAACCTAGCATTTTCGCCTCCAACGCCAAATCCATGGACCTCCAATTCTCTAAAGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGCCAGTGTCTCTTACGGCAAACTAGGATCCTCCCTCTTCCTCACTCCTCCGCCAGTCTCAGCCGGAAAACCTCCTCTCTCCTCCGCTCCGATCAAGAAGAGGTGTCACGACCACCGCGAACACTCCGACGAGATCTCCGGGAAACTCTCCGGCTCCAGCAAGTGCCACTGCACTAAGAGAAGGAAGAATCGAGTGAAGAAAACGGTAAGAGTTCCGGTGATCAGTTCGAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCGCCGTACCCGAGGGGGTATTACAAGTGCAGTAGCGTTAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTCCGGACGATCCGACGATGTTGATTGTGACATATGAAGGGGAGCACCGGCACTCGATGCAGGAGAACATTTCCGGGGGAGTGGGTTTGGGATTCGAGTCAACGTGA | 903 | 0.567 | MTVELMGFPKMEEQKAIQEAASEGLKAMEHLLRLLSYQPSHLHAHHTDATVSNFKKLISLLSRRTGHARFRRAPLPSPPPANPVTLHQPPSTFVPSHSQSLTLDFTKPSIFASNAKSMDLQFSKETFSVSSNSSFMSSAITGDASVSYGKLGSSLFLTPPPVSAGKPPLSSAPIKKRCHDHREHSDEISGKLSGSSKCHCTKRRKNRVKKTVRVPVISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAPDDPTMLIVTYEGEHRHSMQENISGGVGLGFEST* | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g0651 | 300 | MobiDBLite | consensus disorder prediction | 72 | 93 | - | - | |
Gso6g0651 | 300 | MobiDBLite | consensus disorder prediction | 183 | 204 | - | - | |
Gso6g0651 | 300 | Pfam | Plant zinc cluster domain | 175 | 223 | IPR018872 | - | |
Gso6g0651 | 300 | ProSiteProfiles | WRKY domain profile. | 220 | 286 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso6g0651 | 300 | PANTHER | WRKY PROTEIN | 10 | 287 | - | - | |
Gso6g0651 | 300 | SUPERFAMILY | WRKY DNA-binding domain | 223 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso6g0651 | 300 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 10 | 287 | IPR044810 | GO:0003700 | |
Gso6g0651 | 300 | Gene3D | WRKY domain | 210 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso6g0651 | 300 | Pfam | WRKY DNA -binding domain | 227 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso6g0651 | 300 | SMART | WRKY_cls | 225 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g0651 | Gso-Chr6 | 6032375 | 6034240 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g0651 | 1 | 299 | WRKY Transcription Factor Family | AT2G24570 | 61.656 | 6.91e-116 | 335 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso6g0651 | WRKY | 6.5e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g0651 | - | - | gmx:100170746 | 573.933 |