Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0631 ATGTCGCTGATGATGGAGGATCAAGCGAATCAAGCGCCACCGCCGCAGGATGAAGAGGAGGATTCTAAGAAGGAGGAAGAGGAATTGATTGCGAAGGTCAACAAACTCATGGAGAAGATTACTTCTGCACCTGATAACCCTAACGCCACCGTCCTCCACGCCCTTGCCTCTATTCTTGAAGCGCAAGAGTCACGATACATGGAAGAGAATGGTCATTCTTCCTCCAGCACTGCACGTGCTGCGCATATCATTGGTCGCCTTGGCGGTTTAATCCGGGAAAATGATGAGTTCTTTGAGTTGATATCTTCAAAGTTTCTGTTAGAAACAAGATACTCGACTTCCATTCAAGCTGCTTCTGGCAGACTTCTCCTGTGCTGTTCCCTCACTTGGATTTATCCTCATGTTTTTGAAGAATCTGTCATGGAAAACATAAAAAATTGGGTGATGGATGATAACACCGGGTTGCCTGCTGAAGAGCAGAATTTGAGGCATAATCCAGGTAGAAGTGAGGCGGCCTCAGATTCTGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCTGTGTGTTTGGACGGTCAAGGTCAAATAGTGGAAGACGTATTGACATCTGGCTTGTCAGCTAAGCTAATGCGTTATCTTCGTATAAGCGTGCTGGGAGAGACAAGTGGCAACCAGAAAGATGTTACTCATATAACAGAGAGTAGGCATGCATCTACGAATACTTCAGCAAGAGGTAGAGACGATGGTCGTGGTAGATTTCGCCAGCTCCTCGAATCAAATCATTTAGATGATACTAAGATGATTGATGAGAGATCTTTAGATGACGTAACTCTTGAAAGGGTAGATGGTGAACCACCCGATGGGCTTGGTGAAGGTACTGATGTCCACAAGGTAGATTCTGATGGGGAGGATACATGGCGCTGTAGAGATATACGTGATGGAAGGATAAAATATGGTGAGCATGACGATAATATTAGAGATGACTCTTCAAGGCGGCGTGCAAACCGTGGATGGGGAAGATCTAGAGGGAAAGGTAGGGTCAATGAAGGGGCTGTAGAAAGTGATCCTATTTTGTCGTCTCCTGGATCTGGAAGTAGATTAGGACAGGGGCGGAGTGTTAGAGACAGAAGCATATTGAGGAATGCTGACGTTAGGAGGGGGGCTGATTCTAAGAAGACCCTTGGCAGGATCCCTTCCGAGGCTTCTGCTTTTGAAAGAGAGGATGATGATGATTGTTTCGAAGAGTGCCGAATTGGTAGTAAAGATATTACCGATCTGGTCCGGAAGGCAGTCCGATCTGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCCGCTGACCTTGTTAAAACTGCAGCTTCTGAGGAATATAAATCCAGCAATGATGAAGAAGCAGCTTTTTTGGCTGCTTCGAGAGCTACATCAACTGTTATTGATGCTGCATCTGCAGTTGAAGTTTCAAGGAGTTCTATCTGCGACAATACTGTGACAGAGAATGTGAGTGGCAAAGAAACGGAAACTAATGAGGATGTTGAAGAGTACTTCATCCCAGATACTAAATCACTTGCACAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTTGGAGAATATGTAGAAGTTCTTGGCCCTGTGTTGCATGAGAAGGGGGTTGATGTGTGTCTTGGACTTCTGCAGAAGAATTCTAAACATTGGGAGGCATCCAAAGTTGCTTTGCTGTTGCCTGATGTCATGAAGCTAATCTGTGCTTTGGCTGCACATAGGAAATTTGCTGCACTATTTGTGGACCGTGGGGGAATGCAAAAGCTGCTTGATGTCCCTAGAATGCCACAAACTTTCTTTGGTCTTTCTTCTTGTCTATTTACTATTGGTTCTCTTCAGGGAATCATGGAACGAGTTTGTGCTCTTCCATCAAAAGTTGTTAATGAAGTTGTTGAGTTAGCTCTCCAACTCCTTGACTGCAATCAAGACCAAGCCCGTAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCAGTTCTTGATGCCTTTGATTCCCTGGATGGATTACAAAAATTACTTGGCCTTCTAAATGATGCTGCTTCAGTAAGATCAGGAGTAAATTCTGGAGCCTTGAATTTATCTAACTCAGGATCACTTCGAAATGATCGATCATCTGCTGAAGTGCTGACGTCATCTGAGAAGCAGATAGCCTATCACACTTGTGTTGCTTTGCGGCAATATTTCAGGGCACATCTCCTTGTCTTAGTGGATTCCATTCGTCCAAACAAAAGCAACCGTAGTGCTGCTAGAAATATTCCAAGTGTAAGGGCTGTGTACAAGCCGCTTGATATTAGTAATGAGGCAATGGATGCAGTATTCCTACAATTACAAAAGGATCGGAAGTTAGGTCCTGCATTTGTGAGAACACGTTGGCTAGCAGTTGAGAAGTTCTTGGCATCTAATGGACATATTACTATGTTGGAATTGTGTCAGGCCCCACCTGTTGAGCGATATCTGCATGATTTGCTTCAGTATGCATTGGGTGTTCTTCACATTGTTACATTGGTACCTAGCAGTCGTAAGATGATTGTAAATGTAACATTAAGCAATAATCGTGTTGGTATCGCGGTAATTTTGGATGCTGCAAATATAGCTAGTAATCATGTGGACCCTGAGATAATTCAACCGGCATTAAATGTTTTAGTCAATCTTGTTTGCCCTCCTCCTTCAATCAGCAATAAACCAGCTATGGTTGCACAAGGTCAGCAATTGGCATCTTCCCAAACATCTAATGGTCCTCCCTCAGAGGCTAGAGATAGAAATGCTGAACGTAATGTCTCAGATAGAGCTGTTCACTCTACCAGCCAGATTGATCCTAGGGAGAGGAATGGGGAGTCCAATGCTGTAGATCGAGGCAGTGCTTCAGGATTAAGTACACAGCCTGTTAATAGTCTTCCACAAACTCCTGTTGCTTCTGCAGCTTCAGGATTGGTTGGCGACCGAAGAATATCTTTGGGTGCAGGAGCAGGTTGTGCTGGCCTTGCTGCACAATTGGAACAAGGATATCGTCAGGCAAGAGAGGTTGTCCGCTCTAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGCATATACTCACCTCCTGCTGCTCTGGACTGTCTTCGTGCTCTAGCATGTCGAGTCCTGCTTGGATTAGCCAGAGATGATACTATCGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTATCGGAACTGATTCGGGATTCAGGCAGCCAAACACTTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCTGCAATTGAGCTAATTGGGATTGTTACTAATTCAGGGCGTGCAAGTACATTAGCTGCTACTGATGCAGCTACTCCAACTTTAAGGCGCATAGAAAGAGCAGCTATAGCTGCTGCGACTCCTATTACTTACCATTCAAGGGAACTCCTGCTCCTAATCCACGAACACCTACAGGCATCTGGATTGGCACAAACTGCTTCTATGTTGCTTAAAGAGGCTCAGTTGACTCCTTTGCCATCATTGGTTCCTCCCTCTTCTCTTGCACAACAACCCATCACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTGCTCTTTCAGGATTTCTCACTCACAAATTAAGGTTTAATGCAAAGGATGATGATGCCGGCTTGAAAAGTGATTCTGTCTCTGCAAAGAAAAAATCACTGACTTTCTCATCATCTTTTCATTCAAGATTTCAACACCTTGACTCTCAGTCATCAGTGAAGAAATTGTCAGATACTGGTAAAGAGTCATCCGAAACTACTGTGGTAGAGACTACATTTGGATCTTCAGTGAAACATAACATTGATACTGGATCTCAGTTTAAGACTCCAATTACCTTGCCAGCGAAACGTAAATTATCTGATTTGAAGGATATATCAATGTTTTCATCGTCTGGAAAACGATTAAACGTTGGAGATCAAGGATTTCGTTCTCCTATTTGTTCAAGTGTAATTCGTAAAAGCTGCCTGCAGAGTGATGCTGTTGGGCTTTTCTCACCAACCTGTAACCTGAAACAGAGCCGTTGTATGGGTGACTTGGTGGATGAGAACCATAGTATTTCAAATCTAGTTCAGATGACACCATCTTCTCAAGTATTAAATGACCTTCAGCCCAACAATGCTGAGCGTGTAACATTAGATTCTTTGGTGGTTCAATATTTGAAGCATCAGCATCGCCAATGCCCAGCTCCTATTACCACTCTTCCTCCACTGTCTCTTCTGCATCCACATGTCTGTCCTGAACCAAAGCGAAGCCTAGATGCCCCTTCTAATGTGACAGCTCGGCTTGGTACACGTGAATTTAAATATATGTATGGGGGAGTGCATGGGAATCGCAGGGATCGTCAATTTGTTTACAGTCGGTTTAGGCCGTGGCGTACTTGTCGGGATGATGCTGGTGCCTTGTTAACATGCATTACATTTGTTGGGGACTCTTCTCATATTGCTGTTGGAAGCCATAATGGGGAGCTCAAATTTTTTGACTCCAACAACAGCAATGTGGTGGAGAGCTACACAGGTCACCAGTCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGTGAGACCCAGCTATTACTTTCTTCAAGCTCCCAAGATGTTAGGTTGTGGGATGCAACATCGATTTTAGGTGGTCCTAGCCATTCATTTGAAGGATGCAAGGCTGCCAGGTTTAGCAATTCTGGGAATGTTTTTGCAGCCTTGTCATCAGAATCTGCACGACGGGAAATTTTGTTATATGATATCCAAACATGTCATATAGAGTCAAAGTTGTCAGATACATTTGCAGCTTCTACAGGGCGAGGTCATGTTTATTCGTTAATCCATTTTAACCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTGTGGGACCGGCGGGTTTCTGGGCCTGTTCATCGGTTTGATCAGTTTACAGACTATGGTGGTGGAGGTTTTCATCCTGCTGGCAACGAGGTTATTATAAACTCTGAAGTCTGGGATTTGCGCAAGTTCAGACTGCTACGCAGTGTACCTTCATTAGATCAAACATCAATAACATTCAATGCACGTGGTGATGTAATGTATGCAATTCTGAGGAGAAATCTTGAGGATGTAATGTCAGCAGTCCACACTCGTCGTGTCAAGCATCCTCTTTTTGCAGCTTTCCGCACAGTGGATGCGATAAATTATTCTGACATTGCAACTATCCCTGTGGATCGCTGTGTTCTTGATTTTGCAGCTGAGCCAACAGATTCATTTGTTGGGCTGATTACTATGGATGATCAAGATGAGATGTATGCTTCTGCCAGAATCTATGAAATTGGTCGTCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGACGAGGATGATGATGACGACGATCCTGATGTTGATCCTCTGTTAGGCCCTGGTCTTGGTGGGGATAGTTGCAGTGATGCTGATGACATGAGCAATGATGACGATGATGATAGTGTGAGTGATCTGGATGAAGATGGAGATTTCATTTTGGATGACGTAGATTTTGATGGAGGACCTGGCATTTTGGAAATTGTGACAGAAGGTGATGAGGATGATGATGATGATAGTCAGCTACTTGAATCCCTAAGTAGTAGTGACGATGAGGATTTTGTGGGTAATGGCTTTGGTTATTAA 5772 0.4409 MSLMMEDQANQAPPPQDEEEDSKKEEEELIAKVNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSSTARAAHIIGRLGGLIRENDEFFELISSKFLLETRYSTSIQAASGRLLLCCSLTWIYPHVFEESVMENIKNWVMDDNTGLPAEEQNLRHNPGRSEAASDSEMLKTYSTGLLAVCLDGQGQIVEDVLTSGLSAKLMRYLRISVLGETSGNQKDVTHITESRHASTNTSARGRDDGRGRFRQLLESNHLDDTKMIDERSLDDVTLERVDGEPPDGLGEGTDVHKVDSDGEDTWRCRDIRDGRIKYGEHDDNIRDDSSRRRANRGWGRSRGKGRVNEGAVESDPILSSPGSGSRLGQGRSVRDRSILRNADVRRGADSKKTLGRIPSEASAFEREDDDDCFEECRIGSKDITDLVRKAVRSAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSSNDEEAAFLAASRATSTVIDAASAVEVSRSSICDNTVTENVSGKETETNEDVEEYFIPDTKSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLGLLQKNSKHWEASKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLDVPRMPQTFFGLSSCLFTIGSLQGIMERVCALPSKVVNEVVELALQLLDCNQDQARKNAALFFAAAFVFRAVLDAFDSLDGLQKLLGLLNDAASVRSGVNSGALNLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNAERNVSDRAVHSTSQIDPRERNGESNAVDRGSASGLSTQPVNSLPQTPVASAASGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREVVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAQTASMLLKEAQLTPLPSLVPPSSLAQQPITQEASSTQIQWPSGRALSGFLTHKLRFNAKDDDAGLKSDSVSAKKKSLTFSSSFHSRFQHLDSQSSVKKLSDTGKESSETTVVETTFGSSVKHNIDTGSQFKTPITLPAKRKLSDLKDISMFSSSGKRLNVGDQGFRSPICSSVIRKSCLQSDAVGLFSPTCNLKQSRCMGDLVDENHSISNLVQMTPSSQVLNDLQPNNAERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYTGHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCKAARFSNSGNVFAALSSESARREILLYDIQTCHIESKLSDTFAASTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGLITMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDPDVDPLLGPGLGGDSCSDADDMSNDDDDDSVSDLDEDGDFILDDVDFDGGPGILEIVTEGDEDDDDDSQLLESLSSSDDEDFVGNGFGY* 1924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0631 1923 SMART WD40_4 1536 1576 IPR001680 GO:0005515
Gso6g0631 1923 SMART WD40_4 1581 1619 IPR001680 GO:0005515
Gso6g0631 1923 SMART WD40_4 1493 1533 IPR001680 GO:0005515
Gso6g0631 1923 Gene3D - 1494 1818 IPR015943 GO:0005515
Gso6g0631 1923 PANTHER VPRBP PROTEIN-RELATED 18 949 IPR033270 GO:0016567
Gso6g0631 1923 PANTHER VPRBP PROTEIN-RELATED 985 1271 IPR033270 GO:0016567
Gso6g0631 1923 PANTHER VPRBP PROTEIN-RELATED 1290 1804 IPR033270 GO:0016567
Gso6g0631 1923 MobiDBLite consensus disorder prediction 1817 1838 - -
Gso6g0631 1923 Coils Coil 19 43 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 1853 1878 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 1804 1923 - -
Gso6g0631 1923 PANTHER BNAA03G51310D PROTEIN 18 949 - -
Gso6g0631 1923 PANTHER BNAA03G51310D PROTEIN 1290 1804 - -
Gso6g0631 1923 PANTHER BNAA03G51310D PROTEIN 985 1271 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 1891 1908 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 977 997 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 319 384 - -
Gso6g0631 1923 SMART Lish 1165 1197 IPR006594 GO:0005515
Gso6g0631 1923 SUPERFAMILY WD40 repeat-like 1507 1728 IPR036322 GO:0005515
Gso6g0631 1923 MobiDBLite consensus disorder prediction 275 301 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 319 335 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 924 997 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 226 251 - -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 1 27 - -
Gso6g0631 1923 SUPERFAMILY ARM repeat 549 1105 IPR016024 -
Gso6g0631 1923 MobiDBLite consensus disorder prediction 924 945 - -
Gso6g0631 1923 ProSiteProfiles LIS1 homology (LisH) motif profile. 1165 1197 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0631 Gso-Chr6 5849776 5858420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0631 1520 1726 U-box Gene Family AT2G33340 25.000 7.80e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0631 K11789 - gmx:100800133 3414.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0628 4 6117002 6126316 Gso6g0631 6 5849776 5858420 GST